RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 KLF9Q13886 244 aaPredicted RBP25.81■■□□□ 1.72
CCM2-219ENST00000544363 ARL6IP1Q15041 203 aa25.81■■□□□ 1.72
CCM2-219ENST00000544363 PRAMEF6Q5VXH4 476 aa25.81■■□□□ 1.72
CCM2-219ENST00000544363 SIGIRRQ6IA17 410 aa25.81■■□□□ 1.72
CCM2-219ENST00000544363 GDPD3Q7L5L3 318 aa25.81■■□□□ 1.72
CCM2-219ENST00000544363 HS3ST6Q96QI5 342 aa25.81■■□□□ 1.72
CCM2-219ENST00000544363 LYRM1O43325 122 aa25.8■■□□□ 1.72
CCM2-219ENST00000544363 PTBP3O95758 552 aaKnown RBP25.8■■□□□ 1.72
CCM2-219ENST00000544363 ECDO95905 644 aaPredicted RBP25.8■■□□□ 1.72
CCM2-219ENST00000544363 SSBP1Q04837 148 aaKnown RBP25.8■■□□□ 1.72
CCM2-219ENST00000544363 PNLIPRP3Q17RR3 467 aa25.8■■□□□ 1.72
CCM2-219ENST00000544363 Q8IYB0 196 aa25.8■■□□□ 1.72
CCM2-219ENST00000544363 NEUROG1Q92886 237 aa25.8■■□□□ 1.72
CCM2-219ENST00000544363 COX4I2Q96KJ9 171 aa25.8■■□□□ 1.72
CCM2-219ENST00000544363 ZFYVE26Q68DK2 2539 aa25.8■■□□□ 1.72
CCM2-219ENST00000544363 MEIS3P1A6NDR6 274 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A10PA6NDY2 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A18PA6NE21 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A16PA6NEW6 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A20PA6NIJ5 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A8PA6NJQ4 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A7PA6NKC0 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A22PA8MWA6 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A12PA8MX19 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A5PA8MXJ8 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A23PA8MXZ1 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 PRSS44E7EML9 344 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 SPRY3O43610 288 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 PLAUP00749 431 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A15PP0C7V4 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A13PP0C7W8 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A14PP0C7W9 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM90A24PP0C7X0 464 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 PGA5P0DJD9 388 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 PRKACAP17612 351 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 LOXP28300 417 aaPredicted RBP25.79■■□□□ 1.72
CCM2-219ENST00000544363 SERPINF1P36955 418 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 ERVK11-1P61568 191 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 OLFML2AQ68BL7 652 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 FAM58AQ8N1B3 248 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 PLEKHJ1Q9NW61 149 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 ZDHHC8Q9ULC8 765 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 HSF4Q9ULV5 492 aa25.79■■□□□ 1.72
CCM2-219ENST00000544363 ANKRD20A5PA0PJZ0 165 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 A6NLC8 198 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 KIR2DL3P43628 341 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 RFX2P48378 723 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 AP3S2P59780 193 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 DYRK1AQ13627 763 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 MPPED2Q15777 294 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 MZT2BQ6NZ67 158 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 CELF2-AS1Q8N7Q2 184 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 ST8SIA4Q92187 359 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 EMG1Q92979 244 aaKnown RBP25.78■■□□□ 1.72
CCM2-219ENST00000544363 PIK3IP1Q96FE7 263 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 NEDD4LQ96PU5 975 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 ZNF581Q9P0T4 197 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 CACNG2Q9Y698 323 aa25.78■■□□□ 1.72
CCM2-219ENST00000544363 NOS1APO75052 506 aaPredicted RBP25.77■■□□□ 1.72
CCM2-219ENST00000544363 CHATP28329 748 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 GNG2P59768 71 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 DAZAP2Q15038 168 aaPredicted RBP25.77■■□□□ 1.72
CCM2-219ENST00000544363 NKAPLQ5M9Q1 402 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 Q6ZNX1 250 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 C6orf201Q7Z4U5 140 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 NRARPQ7Z6K4 114 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 NUDCD2Q8WVJ2 157 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 MEGF10Q96KG7 1140 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 OR2V2Q96R30 315 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 NRIP2Q9BQI9 281 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 UFSP2Q9NUQ7 469 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 TAS2R8Q9NYW2 309 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 ANKHD1Q8IWZ3 2542 aaKnown RBP25.77■■□□□ 1.72
CCM2-219ENST00000544363 SERPINE3A8MV23 424 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 APOBEC3AP31941 199 aaPredicted RBP25.77■■□□□ 1.72
CCM2-219ENST00000544363 SNU13P55769 128 aaKnown RBP25.77■■□□□ 1.72
CCM2-219ENST00000544363 ACTBP60709 375 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 ACTG1P63261 375 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 ZNF826PQ6ZT77 177 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 TRAPPC6BQ86SZ2 158 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 POC1AQ8NBT0 407 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 TMEM204Q9BSN7 226 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 IL36RNQ9UBH0 155 aa25.77■■□□□ 1.72
CCM2-219ENST00000544363 A0A1B0GVG6 124 aa25.76■■□□□ 1.71
CCM2-219ENST00000544363 SSX4O60224 188 aa25.76■■□□□ 1.71
CCM2-219ENST00000544363 IGHV1-46P01743 117 aa25.76■■□□□ 1.71
CCM2-219ENST00000544363 PCGF3Q3KNV8 242 aa25.76■■□□□ 1.71
CCM2-219ENST00000544363 WDR82Q6UXN9 313 aa25.76■■□□□ 1.71
CCM2-219ENST00000544363 LINC00596Q86U02 117 aa25.76■■□□□ 1.71
CCM2-219ENST00000544363 CYYR1Q96J86 154 aa25.76■■□□□ 1.71
CCM2-219ENST00000544363 C7orf50Q9BRJ6 194 aaKnown RBP25.76■■□□□ 1.71
CCM2-219ENST00000544363 SSX5O60225 188 aa25.75■■□□□ 1.71
CCM2-219ENST00000544363 PDCD6O75340 191 aa25.75■■□□□ 1.71
CCM2-219ENST00000544363 CA11O75493 328 aa25.75■■□□□ 1.71
CCM2-219ENST00000544363 OR7C1O76099 320 aaPredicted RBP25.75■■□□□ 1.71
CCM2-219ENST00000544363 SPNP16150 400 aa25.75■■□□□ 1.71
CCM2-219ENST00000544363 IL13RA2Q14627 380 aa25.75■■□□□ 1.71
CCM2-219ENST00000544363 PDCD1Q15116 288 aa25.75■■□□□ 1.71
CCM2-219ENST00000544363 MPV17LQ2QL34 196 aa25.75■■□□□ 1.71
CCM2-219ENST00000544363 LILRB1Q8NHL6 650 aaPredicted RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms