RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 FAM192AQ9GZU8 254 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 CNTD2Q9H8S5 307 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 HMG20AQ9NP66 347 aa10.19□□□□□ -0.78
DDX55-210ENST00000543016 MRPS28Q9Y2Q9 187 aaKnown RBP10.19□□□□□ -0.78
DDX55-210ENST00000543016 IGKV1-12A0A0C4DH73 117 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 F5H0A9 414 aaPredicted RBP10.18□□□□□ -0.78
DDX55-210ENST00000543016 H7C1Q1 480 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 SLC22A1O15245 554 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 ANGPTL7O43827 346 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 BPNT1O95861 308 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 IGKV1D-12P01611 117 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 IGHV2-5P01817 119 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 WNT2P09544 360 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 GTF2F2P13984 249 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 RPS2P15880 293 aaKnown RBP10.18□□□□□ -0.78
DDX55-210ENST00000543016 HTR2CP28335 458 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 OR3A4PP47883 348 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 LMO4P61968 165 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 FAM189A2Q15884 450 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 NHLRC3Q5JS37 347 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 FAM201AQ5SY85 155 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 AWAT2Q6E213 333 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 LINC00596Q86U02 117 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 OR8B3Q8NGG8 313 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 OR51T1Q8NGJ9 327 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 SDSLQ96GA7 329 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 C18orf12Q96KH6 178 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 OR8B2Q96RD0 313 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 MRI1Q9BV20 369 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 FAM234AQ9H0X4 552 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 CST11Q9H112 138 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 WDR13Q9H1Z4 485 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 ZNF665Q9H7R5 613 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 ELL3Q9HB65 397 aaPredicted RBP10.18□□□□□ -0.78
DDX55-210ENST00000543016 PLGRKTQ9HBL7 147 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 ING4Q9UNL4 249 aa10.18□□□□□ -0.78
DDX55-210ENST00000543016 AK6Q9Y3D8 172 aaKnown RBP10.18□□□□□ -0.78
DDX55-210ENST00000543016 ITPR3Q14573 2671 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 MAST4O15021 2626 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 IFITM5A6NNB3 132 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 NOTOA8MTQ0 251 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 B4DSR2 109 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 WNT9BO14905 357 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 ADAM20O43506 726 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 FOXH1O75593 365 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 GABARAPO95166 117 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 ZNF205O95201 554 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 GYPAP02724 150 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 SFTPBP07988 381 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 CHRM2P08172 466 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 PSG2P11465 335 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 CD99P14209 185 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 BCL3P20749 454 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 PRDX2P32119 198 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 NPBWR2P48146 333 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 IL13RA1P78552 427 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 IL13RA2Q14627 380 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 RAB11BQ15907 218 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 DGUOKQ16854 277 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 ESCO2Q56NI9 601 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 FAM166AQ6J272 317 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 GLIPR1L1Q6UWM5 242 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 ZNF788Q6ZQV5 615 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 RNF144BQ7Z419 303 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 ZNF561Q8N587 486 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 CHST4Q8NCG5 386 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 OR4D6Q8NGJ1 314 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 KCNG3Q8TAE7 436 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 PPP1R35Q8TAP8 253 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 DMRTB1Q96MA1 342 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 ZNF488Q96MN9 340 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 CENPOQ9BU64 300 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 TMUB1Q9BVT8 246 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 RBFOX1Q9NWB1 397 aaKnown RBP10.17□□□□□ -0.78
DDX55-210ENST00000543016 FBLN5Q9UBX5 448 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 STEAP1Q9UHE8 339 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 ZNF222Q9UK12 451 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 CSMD1Q96PZ7 3565 aa10.17□□□□□ -0.78
DDX55-210ENST00000543016 CSMD2Q7Z408 3487 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 IGKV1D-17A0A075B6S4 117 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 IGHV3OR15-7A0A075B7D8 119 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 PPIAL4CA0A0B4J2A2 164 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A10PA6NDY2 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A18PA6NE21 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A16PA6NEW6 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A20PA6NIJ5 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A8PA6NJQ4 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A7PA6NKC0 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 RFPL4AA6NLU0 287 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A22PA8MWA6 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A12PA8MX19 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A5PA8MXJ8 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 A8MXK9 166 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 FAM90A23PA8MXZ1 464 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 RFPL4AL1F8VTS6 287 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 F8VVB4 439 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 F8VWA3 439 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 AIPO00170 330 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 SH2D1BO14796 132 aa10.16□□□□□ -0.78
DDX55-210ENST00000543016 SIGLEC5O15389 551 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms