RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 NUBP2Q9Y5Y2 271 aa9.4□□□□□ -0.9
SCG3-202ENST00000542355 TLN1Q9Y490 2541 aaKnown RBP9.4□□□□□ -0.9
SCG3-202ENST00000542355 IGHV3-64DA0A0J9YX35 117 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 ZNF736B4DX44 427 aaPredicted RBP9.4□□□□□ -0.91
SCG3-202ENST00000542355 F8VVB4 439 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 F8VWA3 439 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 H0YL77 283 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 TIMM8AO60220 97 aaPredicted RBP9.4□□□□□ -0.91
SCG3-202ENST00000542355 OR8G1Q15617 311 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 PNLIPRP3Q17RR3 467 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 AGAP6Q5VW22 663 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 SIGIRRQ6IA17 410 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 OR52W1Q6IF63 320 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 RGS7BPQ6MZT1 257 aaPredicted RBP9.4□□□□□ -0.91
SCG3-202ENST00000542355 PCSK4Q6UW60 755 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 ZNF782Q6ZMW2 699 aaPredicted RBP9.4□□□□□ -0.91
SCG3-202ENST00000542355 C1orf174Q8IYL3 243 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 OR8G5Q8NG78 346 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 OR56B4Q8NH76 319 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 DEDD2Q8WXF8 326 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 HS3ST6Q96QI5 342 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 RTL8AQ9BWD3 113 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 OR51I2Q9H344 312 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 IFT46Q9NQC8 304 aa9.4□□□□□ -0.91
SCG3-202ENST00000542355 RP1L1Q8IWN7 2480 aaPredicted RBP9.39□□□□□ -0.91
SCG3-202ENST00000542355 TRAPPC2LH3BP13 241 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 M0QYG6 137 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 RAB3DO95716 219 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 SNU13P55769 128 aaKnown RBP9.39□□□□□ -0.91
SCG3-202ENST00000542355 CD300CQ08708 224 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 FAM76BQ5HYJ3 339 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 MBNL2Q5VZF2 373 aaKnown RBP9.39□□□□□ -0.91
SCG3-202ENST00000542355 SEZ6L2Q6UXD5 910 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 BTN2A1Q7KYR7 527 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 TMEM200AQ86VY9 491 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 WFDC8Q8IUA0 241 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 SAXO1Q8IYX7 474 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 OR10AD1Q8NGE0 317 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 ZNF488Q96MN9 340 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 FAAP24Q9BTP7 215 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 FLVCR2Q9UPI3 526 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 MYO7BQ6PIF6 2116 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 A0A1W2PPH5 198 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 ATP6V1G2-DDX39BF2Z307 99 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 RHBDL1O75783 438 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 GRPP07492 148 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 KITLGP21583 273 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 CD40P25942 277 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 MSMPQ1L6U9 139 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 WDR86Q86TI4 376 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 ZNF554Q86TJ5 538 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 LRP11Q86VZ4 500 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 OR51S1Q8NGJ8 323 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 ST8SIA4Q92187 359 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 HPS1Q92902 700 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 FBXW5Q969U6 566 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 ST6GALNAC5Q9BVH7 336 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 TINAGL1Q9GZM7 467 aaPredicted RBP9.39□□□□□ -0.91
SCG3-202ENST00000542355 OR10A4Q9H209 315 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 MSL2Q9HCI7 577 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 NOP16Q9Y3C1 178 aaKnown RBP9.39□□□□□ -0.91
SCG3-202ENST00000542355 ALG5Q9Y673 324 aa9.39□□□□□ -0.91
SCG3-202ENST00000542355 CACNA1AO00555 2505 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 SERPINE3A8MV23 424 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 ATXN7O15265 892 aaPredicted RBP9.38□□□□□ -0.91
SCG3-202ENST00000542355 MLNRO43193 412 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 AKR7A2O43488 359 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 OR7C1O76099 320 aaPredicted RBP9.38□□□□□ -0.91
SCG3-202ENST00000542355 DHFRP00374 187 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 CSN2P05814 226 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 H2AFB2P0C5Z0 115 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 RBM11P57052 281 aaKnown RBP9.38□□□□□ -0.91
SCG3-202ENST00000542355 FGF12P61328 243 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 BTG1P62324 171 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 IL24Q13007 206 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 ARL6IP1Q15041 203 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 ELP2Q6IA86 826 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 Q8NFD4 153 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 BEX2Q9BXY8 128 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 C20orf85Q9H1P6 137 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 BEX1Q9HBH7 125 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.38□□□□□ -0.91
SCG3-202ENST00000542355 ZNF230Q9UIE0 474 aaPredicted RBP9.38□□□□□ -0.91
SCG3-202ENST00000542355 ZNF107Q9UII5 783 aaPredicted RBP9.38□□□□□ -0.91
SCG3-202ENST00000542355 PRR14LQ5THK1 2151 aa9.38□□□□□ -0.91
SCG3-202ENST00000542355 LRP5LA4QPB2 252 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 CDIPTO14735 213 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 AMY2AP04746 511 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 THBDP07204 575 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 GLRXP35754 106 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 ZNF154Q13106 437 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 NKPD1Q17RQ9 610 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 TMEM108Q6UXF1 575 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 Q6ZR03 302 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 SCCPDHQ8NBX0 429 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 WFIKKN1Q96NZ8 548 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 PKIBQ9C010 78 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 IL36RNQ9UBH0 155 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 HSF4Q9ULV5 492 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 F5H5P2 479 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms