RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MITD1Q8WV92 249 aa14.14□□□□□ -0.15
VARS2-212ENST00000542001 INTS12Q96CB8 462 aaKnown RBP14.14□□□□□ -0.15
VARS2-212ENST00000542001 CDX2Q99626 313 aaPredicted RBP14.14□□□□□ -0.15
VARS2-212ENST00000542001 LINC00862A6NCI5 91 aa14.14□□□□□ -0.15
VARS2-212ENST00000542001 CDRT15L2A8MXV6 281 aa14.14□□□□□ -0.15
VARS2-212ENST00000542001 JTBO76095 146 aa14.14□□□□□ -0.15
VARS2-212ENST00000542001 H2AFB1P0C5Y9 115 aa14.14□□□□□ -0.15
VARS2-212ENST00000542001 FPR2P25090 351 aa14.14□□□□□ -0.15
VARS2-212ENST00000542001 TAGLN2P37802 199 aaKnown RBP14.14□□□□□ -0.15
VARS2-212ENST00000542001 MLF1P58340 268 aa14.14□□□□□ -0.15
VARS2-212ENST00000542001 RTN4RL2Q86UN3 420 aa14.14□□□□□ -0.15
VARS2-212ENST00000542001 OR2Y1Q8NGV0 311 aa14.14□□□□□ -0.15
VARS2-212ENST00000542001 ZNF519Q8TB69 540 aa14.14□□□□□ -0.15
VARS2-212ENST00000542001 TRIB1Q96RU8 372 aa14.14□□□□□ -0.15
VARS2-212ENST00000542001 ERRFI1Q9UJM3 462 aaPredicted RBP14.14□□□□□ -0.15
VARS2-212ENST00000542001 KRASP01116 189 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 IFNA4P05014 189 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 FUT3P21217 361 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 HIST2H3PS2Q5TEC6 136 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 RPUSD3Q6P087 351 aaKnown RBP14.13□□□□□ -0.15
VARS2-212ENST00000542001 TMEM65Q6PI78 240 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 SLC25A42Q86VD7 318 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 HES7Q9BYE0 225 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 DEFB108AA8MXU0 73 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 KLRC4-KLRK1H3BQV0 150 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 NECAP1Q8NC96 275 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 C12orf57Q99622 126 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 TIMP4Q99727 224 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 OPA3Q9H6K4 179 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 GFOD1Q9NXC2 390 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 MAGEA5P43359 124 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 IGLV3-21P80748 117 aaPredicted RBP14.13□□□□□ -0.15
VARS2-212ENST00000542001 PMP22Q01453 160 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 SSBP1Q04837 148 aaKnown RBP14.13□□□□□ -0.15
VARS2-212ENST00000542001 DRAM2Q6UX65 266 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 LINC00114Q6XXX2 140 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 ZDHHC23Q8IYP9 409 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 G6PC2Q9NQR9 355 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 DENND4CQ5VZ89 1909 aa14.13□□□□□ -0.15
VARS2-212ENST00000542001 OR6C6A6NF89 314 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 TBPP20226 339 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 MPLP40238 635 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 MECP2P51608 486 aaKnown RBP14.12□□□□□ -0.15
VARS2-212ENST00000542001 NDUFA6P56556 154 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 ROM1Q03395 351 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 SNAI3Q3KNW1 292 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 RNF144BQ7Z419 303 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 ZNF524Q96C55 264 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 CHD7Q9P2D1 2997 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 AQP7P3A6NL99 342 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 RNASEK-C17orf49H0YIS7 233 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 ZNF260Q3ZCT1 412 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 ZNF574Q6ZN55 896 aaPredicted RBP14.12□□□□□ -0.15
VARS2-212ENST00000542001 LHFPL2Q6ZUX7 228 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 ANXA10Q9UJ72 324 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 TCFL5Q9UL49 500 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 PRUNE2Q8WUY3 3088 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 MPTX1A8MV57 137 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 TRIM77I1YAP6 450 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 ARG1P05089 322 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 SFTA3P0C7M3 94 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 IL11RAQ14626 422 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 OR2A2Q6IF42 318 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 SPSB2Q99619 263 aa14.12□□□□□ -0.15
VARS2-212ENST00000542001 FAM74A7A6NL05 159 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 TRAF3IP2O43734 574 aaPredicted RBP14.11□□□□□ -0.15
VARS2-212ENST00000542001 SCAF4O95104 1147 aaKnown RBP14.11□□□□□ -0.15
VARS2-212ENST00000542001 IFNA10P01566 189 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 NAT2P11245 290 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 RAB4BP61018 213 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 ZNF816Q0VGE8 651 aaPredicted RBP14.11□□□□□ -0.15
VARS2-212ENST00000542001 GUCA2BQ16661 112 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 FAM74A3Q4VXF1 159 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 CDCP2Q5VXM1 449 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 TCTEX1D2Q8WW35 142 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 TPPPO94811 219 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 PRDX4Q13162 271 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 CT55Q8WUE5 264 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 SLC39A9Q9NUM3 307 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 ADAM20O43506 726 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 RAC3P60763 192 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 BAXQ07812 192 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 OR5B12Q96R08 314 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 PIPOXQ9P0Z9 390 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 HS3ST3B1Q9Y662 390 aa14.11□□□□□ -0.15
VARS2-212ENST00000542001 RAB19A4D1S5 217 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 E5RGE8 158 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 TMEM267Q0VDI3 215 aaPredicted RBP14.1□□□□□ -0.15
VARS2-212ENST00000542001 UNC119Q13432 240 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 RAB35Q15286 201 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 ADIRFQ15847 76 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 LRRC75AQ8NAA5 344 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 RPS4Y2Q8TD47 263 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 NIT2Q9NQR4 276 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 SMCO4Q9NRQ5 59 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 NSG2Q9Y328 171 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 PRR14LQ5THK1 2151 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 IGHV3-43A0A0B4J1X8 118 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 IGHV3-43DP0DP04 118 aa14.1□□□□□ -0.15
VARS2-212ENST00000542001 FKBP2P26885 142 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms