RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 GBGT1Q8N5D6 347 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 SLC37A3Q8NCC5 494 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 MAPK1IP1LQ8NDC0 245 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 SDR9C7Q8NEX9 313 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 SLC26A10Q8NG04 563 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 KLF14Q8TD94 323 aaPredicted RBP4.52□□□□□ -1.69
CPSF7-220ENST00000541963 RAB1CQ92928 201 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 SPTSSAQ969W0 71 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 APOBEC3DQ96AK3 386 aaPredicted RBP4.52□□□□□ -1.69
CPSF7-220ENST00000541963 TIMD4Q96H15 378 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 TSSK2Q96PF2 358 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 FEVQ99581 238 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 PITX2Q99697 317 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 APOL4Q9BPW4 351 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 HCAR1Q9BXC0 346 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 GON7Q9BXV9 100 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 OR2J1Q9GZK6 312 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 SLA2Q9H6Q3 261 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 ROS1P08922 2347 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 POLQO75417 2590 aa4.52□□□□□ -1.69
CPSF7-220ENST00000541963 CCDC168Q8NDH2 2452 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 HRNRQ86YZ3 2850 aaPredicted RBP4.51□□□□□ -1.69
CPSF7-220ENST00000541963 SAA2-SAA4A0A096LPE2 208 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 A0A0B4J293 547 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 IGHV1-69-2A0A0G2JMI3 117 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 FAM25EA8MYX2 175 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 PRR23D1E9PI22 279 aaPredicted RBP4.51□□□□□ -1.69
CPSF7-220ENST00000541963 F5H5K5 113 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF593O00488 134 aaPredicted RBP4.51□□□□□ -1.69
CPSF7-220ENST00000541963 DVL1O14640 695 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 BET1O15155 118 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 RER1O15258 196 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 PPIHO43447 177 aaKnown RBP4.51□□□□□ -1.69
CPSF7-220ENST00000541963 SNAPC5O75971 98 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 SOX14O95416 240 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 TGFAP01135 160 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 NGFP01138 241 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 APOC1P02654 83 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 TACSTD2P09758 323 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 PRR23D2P0DMB1 279 aaPredicted RBP4.51□□□□□ -1.69
CPSF7-220ENST00000541963 HNF1AP20823 631 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 KITLGP21583 273 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 COL8A2P25067 703 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 FASP25445 335 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 GABRA5P31644 462 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 WNT5AP41221 380 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 MAGEB1P43366 347 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 BMXP51813 675 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 ERVS71-1P61550 626 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 HIST1H3AP68431 136 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 CCL8P80075 99 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 PSG7Q13046 419 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 IL18R1Q13478 541 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 KCNJ8Q15842 424 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 KRTAP21-3Q3LHN1 58 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 CHRFAM7AQ494W8 412 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 SPATA46Q5T0L3 261 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 HIST2H3PS2Q5TEC6 136 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 FAM166AQ6J272 317 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 SHQ1Q6PI26 577 aaKnown RBP4.51□□□□□ -1.69
CPSF7-220ENST00000541963 CORO6Q6QEF8 472 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 IDO2Q6ZQW0 420 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 HIST2H3AQ71DI3 136 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 PRSS48Q7RTY5 328 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 SLC51BQ86UW2 128 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 HIPK1Q86Z02 1210 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 ODF3L1Q8IXM7 274 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF101Q8IZC7 436 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 CYB561A3Q8NBI2 242 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 OR13F1Q8NGS4 319 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 OR13G1Q8NGZ3 307 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 OR52I2Q8NH67 350 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 OR5K1Q8NHB7 308 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 SETD6Q8TBK2 473 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 SLAMF9Q96A28 289 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 HAVCR1Q96D42 359 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 CMBLQ96DG6 245 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF479Q96JC4 524 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF582Q96NG8 517 aaPredicted RBP4.51□□□□□ -1.69
CPSF7-220ENST00000541963 ATF6BQ99941 703 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 NIPSNAP1Q9BPW8 284 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 PRRG3Q9BZD7 231 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 BPESC1Q9GZL8 116 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 MARCH7Q9H992 704 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 CMC2Q9NRP2 79 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 MYEF2Q9P2K5 600 aaKnown RBP4.51□□□□□ -1.69
CPSF7-220ENST00000541963 CYB5R1Q9UHQ9 305 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 ENOPH1Q9UHY7 261 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 PURGQ9UJV8 347 aaKnown RBP4.51□□□□□ -1.69
CPSF7-220ENST00000541963 NUP50Q9UKX7 468 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 STARD10Q9Y365 291 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 NOP16Q9Y3C1 178 aaKnown RBP4.51□□□□□ -1.69
CPSF7-220ENST00000541963 OR2W1Q9Y3N9 320 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 LHFPL6Q9Y693 200 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 ARFGEF3Q5TH69 2177 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 VPS13CQ709C8 3753 aa4.51□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF469Q96JG9 3925 aaPredicted RBP4.51□□□□□ -1.69
CPSF7-220ENST00000541963 F8P00451 2351 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 IGHV4-61A0A0C4DH41 118 aa4.5□□□□□ -1.69
CPSF7-220ENST00000541963 A0A1W2PP11 408 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms