RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, human

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-218	ENST00000541615	RPS14	P62263	151 aa	Known RBP	4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	GNG3	P63215	75 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	OR7A5	Q15622	319 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	CSRP2	Q16527	193 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	HLA-B	Q31612	363 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	CCSMST1	Q4G0I0	132 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	SPANXN4	Q5MJ08	99 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	WIPI1	Q5MNZ9	446 aa	Predicted RBP	4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	ENTPD8	Q5MY95	495 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	AMMECR1L	Q6DCA0	310 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	TRIM40	Q6P9F5	258 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	AGTRAP	Q6RW13	159 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	PAQR6	Q6TCH4	344 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	FOXI2	Q6ZQN5	318 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615		Q7L0L9	218 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	PRSS45	Q7RTY3	260 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	TSEN54	Q7Z6J9	526 aa	Known RBP	4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	SYT12	Q8IV01	421 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	SLC35F2	Q8IXU6	374 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	SIGLECL1	Q8N7X8	197 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	FADS6	Q8N9I5	356 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	LRRC75A	Q8NAA5	344 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	ZNF439	Q8NDP4	499 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	OR10P1	Q8NGE3	313 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	OR4C16	Q8NGL9	310 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	JOSD2	Q8TAC2	188 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	KCNG3	Q8TAE7	436 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	NRGN	Q92686	78 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	FAM131C	Q96AQ9	280 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	LIN37	Q96GY3	246 aa	Predicted RBP	4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	SLC6A18	Q96N87	628 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	TSSK3	Q96PN8	268 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	ABHD14A	Q9BUJ0	271 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	ST6GALNAC5	Q9BVH7	336 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	NMNAT2	Q9BZQ4	307 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	NIF3L1	Q9GZT8	377 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	GTSF1L	Q9H1H1	148 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	IKZF5	Q9H5V7	419 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	JKAMP	Q9P055	326 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	FBXW11	Q9UKB1	542 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	PCTP	Q9UKL6	214 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	DAPP1	Q9UN19	280 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	WDR45	Q9Y484	360 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	WSB1	Q9Y6I7	421 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	PEAK1	Q9H792	1746 aa		4.57	□□□□□ -1.68
SNHG1-218	ENST00000541615	SMIM35	A0A1B0GVV1	85 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615		A0A1W2PQM1	296 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	TSPAN11	A1L157	253 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	ZNF727	A8MUV8	499 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	DIRC3	C9JPN6	131 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615		H3BMH7	237 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	TAX1BP3	O14907	124 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	TAPBP	O15533	448 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	PHF1	O43189	567 aa	Predicted RBP	4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	TBX6	O95947	436 aa	Predicted RBP	4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	CYB5A	P00167	134 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	HRAS	P01112	189 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	IGHG3	P01860	377 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	HLA-DRB1	P01911	266 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	ISG15	P05161	165 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	PFN1	P07737	140 aa	Known RBP	4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	HIST1H1D	P16402	221 aa	Known RBP	4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	HIST1H1T	P22492	207 aa	Predicted RBP	4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	HOXC9	P31274	260 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	ID1	P41134	155 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	KIR2DS4	P43632	304 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	P2RY1	P47900	373 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	REG1B	P48304	166 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	HINT1	P49773	126 aa	Predicted RBP	4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	FOXA1	P55317	472 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	MTCP1	P56278	107 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	RPS16	P62249	146 aa	Known RBP	4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	ARG2	P78540	354 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	MEF2B	Q02080	365 aa	Predicted RBP	4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	ZFP36L1	Q07352	338 aa	Known RBP	4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	PLCXD2	Q0VAA5	305 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	ELOC	Q15369	112 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	MSMO1	Q15800	293 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	LRRC37A5P	Q49AS3	106 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	RNASE12	Q5GAN4	147 aa	Known RBP	4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	FFAR4	Q5NUL3	377 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	DCST2	Q5T1A1	773 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	NCBP2-AS2	Q69YL0	99 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	FCRL6	Q6DN72	434 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	SLC18B1	Q6NT16	456 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	UFSP1	Q6NVU6	142 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	ZNF343	Q6P1L6	599 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	TMEM192	Q8IY95	271 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	SMIM20	Q8N5G0	67 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	TTC9C	Q8N5M4	171 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	OR10S1	Q8NGN2	331 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	OR2T10	Q8NGZ9	312 aa		4.56	□□□□□ -1.68
SNHG1-218	ENST00000541615	OR4K13	Q8NH42	304 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms