RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 NDNFQ8TB73 568 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 RASSF5Q8WWW0 418 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 NELFBQ8WX92 580 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 RAD51AP1Q96B01 352 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 CCDC127Q96BQ5 260 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 SCGB3A2Q96PL1 93 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 HINT2Q9BX68 163 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 OR51B5Q9H339 312 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 SLC40A1Q9NP59 571 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 TNFRSF19Q9NS68 423 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 ZNF226Q9NYT6 803 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 SLC25A37Q9NYZ2 338 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 UVRAGQ9P2Y5 699 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 HEY1Q9Y5J3 304 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 MRPS18BQ9Y676 258 aaKnown RBP3.02□□□□□ -1.93
SNHG1-217ENST00000541578 KIAA1549LQ6ZVL6 1849 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 MGAQ8IWI9 3026 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 KNL1Q8NG31 2342 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 PTPRQQ9UMZ3 2332 aa3.02□□□□□ -1.93
SNHG1-217ENST00000541578 HELZP42694 1942 aaKnown RBP3.01□□□□□ -1.93
SNHG1-217ENST00000541578 ANAPC1Q9H1A4 1944 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 A0A1W2PQ67 120 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 ARGFXA6NJG6 315 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 H3BN98 237 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 SLC22A1O15245 554 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 RBBP9O75884 186 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 KRT75O95678 551 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 INSP01308 110 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 IL6P05231 212 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 GLAP06280 429 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 KLK1P06870 262 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 RHOCP08134 193 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 GIG44P09565 113 aaPredicted RBP3.01□□□□□ -1.93
SNHG1-217ENST00000541578 OR5H8P0DN80 308 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 GFAPP14136 432 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 CD1EP15812 388 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 TCP1P17987 556 aaKnown RBP3.01□□□□□ -1.93
SNHG1-217ENST00000541578 RAB4AP20338 218 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 MYL9P24844 172 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 PHBP35232 272 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 CCR2P41597 374 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 CSNK1DP48730 415 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 RAP1GDS1P52306 607 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 HPCAP84074 193 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 ZNF266Q14584 549 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 USF2Q15853 346 aaPredicted RBP3.01□□□□□ -1.93
SNHG1-217ENST00000541578 C5orf64Q2M2E5 130 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 C4orf22Q6V702 233 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 TPGS1Q6ZTW0 290 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 LINC00173Q6ZV60 143 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 PID1Q7Z2X4 250 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 LRRC6Q86X45 466 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 CEND1Q8N111 149 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 C20orf203Q8NBC4 194 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 OR4S2Q8NH73 311 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 SPPL2BQ8TCT7 592 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 NTAN1Q96AB6 310 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 CREB3L1Q96BA8 519 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 CCDC124Q96CT7 223 aaKnown RBP3.01□□□□□ -1.93
SNHG1-217ENST00000541578 OTUB2Q96DC9 234 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 RMND5BQ96G75 393 aaPredicted RBP3.01□□□□□ -1.93
SNHG1-217ENST00000541578 CPB2Q96IY4 423 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 CTRCQ99895 268 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 PARP12Q9H0J9 701 aaKnown RBP3.01□□□□□ -1.93
SNHG1-217ENST00000541578 KIR3DX1Q9H7L2 352 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 TRIM45Q9H8W5 580 aaPredicted RBP3.01□□□□□ -1.93
SNHG1-217ENST00000541578 SPACA1Q9HBV2 294 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 ANKHQ9HCJ1 492 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 TREM1Q9NP99 234 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 DIABLOQ9NR28 239 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 AP3M1Q9Y2T2 418 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 HES2Q9Y543 173 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 SPTAN1Q13813 2472 aaKnown RBP3.01□□□□□ -1.93
SNHG1-217ENST00000541578 HECTD1Q9ULT8 2610 aa3.01□□□□□ -1.93
SNHG1-217ENST00000541578 TRAV19A0A0A6YYK7 116 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 A6NDN8 102 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 EFCAB10A6NFE3 127 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 TRIM49D1C9J1S8 452 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 GABRPO00591 440 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 NME4O00746 187 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 RFXANKO14593 260 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 NPIPB7O75200 414 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 PSIP1O75475 530 aaKnown RBP3□□□□□ -1.93
SNHG1-217ENST00000541578 PLEKHA8P1O95397 391 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 LDOC1O95751 146 aaPredicted RBP3□□□□□ -1.93
SNHG1-217ENST00000541578 LY6G6DO95868 133 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 BGLAPP02818 100 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 CATP04040 527 aaKnown RBP3□□□□□ -1.93
SNHG1-217ENST00000541578 OR8U9P0C7N5 309 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 ZDHHC11BP0C7U3 371 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 ERGP11308 486 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 PRPS2P11908 318 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 FUT3P21217 361 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 ARL2P36404 184 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 SPAM1P38567 509 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 HSPA9P38646 679 aaKnown RBP3□□□□□ -1.93
SNHG1-217ENST00000541578 P2RX1P51575 399 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 TDGF1P3P51864 188 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 RND2P52198 227 aa3□□□□□ -1.93
SNHG1-217ENST00000541578 NUP107P57740 925 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms