RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PURGQ9UJV8 347 aaKnown RBP10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 NBEAQ8NFP9 2946 aa10.46□□□□□ -0.74
AP003559.1-201ENST00000540906 SMLR1H3BR10 107 aa10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 ATXN7O15265 892 aaPredicted RBP10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 FAUP35544 74 aaKnown RBP10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 PPA1Q15181 289 aa10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 IDO2Q6ZQW0 420 aa10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 C17orf107Q6ZR85 190 aa10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 C5orf24Q7Z6I8 188 aa10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 FAM169BQ8N8A8 192 aa10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 CAPSLQ8WWF8 208 aa10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 OCSTAMPQ9BR26 566 aa10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 ST6GALNAC5Q9BVH7 336 aa10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 JKAMPQ9P055 326 aa10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 ZNF107Q9UII5 783 aaPredicted RBP10.45□□□□□ -0.74
AP003559.1-201ENST00000540906 UBE2QL1A1L167 161 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 ZNF780AO75290 641 aaPredicted RBP10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 CXCL3P19876 107 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 RAG2P55895 527 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 GNG3P63215 75 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 KLRB1Q12918 225 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 RBMS2Q15434 407 aaKnown RBP10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 SCGB2B2Q4G0G5 96 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 PCSK4Q6UW60 755 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 MRGPRGQ86SM5 289 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 HOGA1Q86XE5 327 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 FTMTQ8N4E7 242 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 OR4K15Q8NH41 348 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 DEDD2Q8WXF8 326 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 HIST1H2AAQ96QV6 131 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 ADAT1Q9BUB4 502 aaKnown RBP10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 MSL2Q9HCI7 577 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 PLEKHJ1Q9NW61 149 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 VSIG4Q9Y279 399 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 OR5B21A6NL26 309 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 OR2AT4A6NND4 320 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 AKR7A2O43488 359 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 MPZP25189 248 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 MECP2P51608 486 aaKnown RBP10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 RNASE10Q5GAN6 216 aaKnown RBP10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 ELP2Q6IA86 826 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 TMEM200AQ86VY9 491 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 SAXO1Q8IYX7 474 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 DRAXINQ8NBI3 349 aaPredicted RBP10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 PIGMQ9H3S5 423 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 CACNA1BQ00975 2339 aa10.44□□□□□ -0.74
AP003559.1-201ENST00000540906 TRGV8A0A0C4DH27 118 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 A0A1B0GUH1 482 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 ATP6V1G2-DDX39BF2Z307 99 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 F5H5P2 479 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 SDCBPO00560 298 aaPredicted RBP10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 RLN1P04808 185 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 THBDP07204 575 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 PRKACAP17612 351 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 KITLGP21583 273 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 UBE2MP61081 183 aaKnown RBP10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 FGF12P61328 243 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 ZNF154Q13106 437 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 FAM189A2Q15884 450 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 SPRNQ5BIV9 151 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 FAM76BQ5HYJ3 339 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 ATPAF1Q5TC12 328 aaPredicted RBP10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 GLDNQ6ZMI3 551 aaPredicted RBP10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 C11orf53Q8IXP5 236 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 SCCPDHQ8NBX0 429 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 OR8G5Q8NG78 346 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 MRPS24Q96EL2 167 aaKnown RBP10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 WDR89Q96FK6 387 aaPredicted RBP10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 ZNF701Q9NV72 531 aaPredicted RBP10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 HSF4Q9ULV5 492 aa10.43□□□□□ -0.74
AP003559.1-201ENST00000540906 SERPINE3A8MV23 424 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 PDCD6O75340 191 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 CA11O75493 328 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 OR7C1O76099 320 aaPredicted RBP10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 GRPP07492 148 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 AMY2BP19961 511 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 GMFBP60983 142 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 NKX6-1P78426 367 aaPredicted RBP10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 IL24Q13007 206 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 SNTB1Q13884 538 aaKnown RBP10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 OR8G1Q15617 311 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 C2orf68Q2NKX9 166 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 PRAMEF6Q5VXH4 476 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 MBNL2Q5VZF2 373 aaKnown RBP10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 ZNF826PQ6ZT77 177 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 ZNF573Q86YE8 665 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 MKXQ8IYA7 352 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 DACT3Q96B18 629 aaPredicted RBP10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 RTL8AQ9BWD3 113 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 BCL2L14Q9BZR8 327 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 MED28Q9H204 178 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 SLC2A8Q9NY64 477 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 MEMO1Q9Y316 297 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 SPTA1P02549 2419 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 DISC1C4P0D8 188 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 TRAPPC2LH3BP13 241 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 J3QT63 122 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 CDIPTO14735 213 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 TIMM8AO60220 97 aaPredicted RBP10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 ZNF205O95201 554 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms