RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 C2orf73Q8N5S3 287 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 NUP43Q8NFH3 380 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 OR5L2Q8NGL0 311 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 TMEM170AQ8WVE7 144 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 TMEM37Q8WXS4 190 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 RNF2Q99496 336 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 PLAGL1Q9UM63 463 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 RNF115Q9Y4L5 304 aa8.33□□□□□ -1.08
CTNNA1-243ENST00000540387 FRYLO94915 3013 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 CTSEP14091 401 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 NID1P14543 1247 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 FGF8P55075 233 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 TAF9Q16594 264 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF506Q5JVG8 444 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 LYSMD4Q5XG99 296 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 TOMM20LQ6UXN7 152 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 TMPRSS7Q7RTY8 843 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 SGPP2Q8IWX5 399 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 CHST4Q8NCG5 386 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 OR2AJ1Q8NGZ0 328 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 ZCCHC14Q8WYQ9 949 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 IL17FQ96PD4 163 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 MS4A10Q96PG2 267 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 CIB3Q96Q77 187 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 ALG12Q9BV10 488 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 WWTR1Q9GZV5 400 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 RBKSQ9H477 322 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 MTHFD2LQ9H903 347 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 P4HTMQ9NXG6 502 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 PAM16Q9Y3D7 125 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 CABIN1Q9Y6J0 2220 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 TRAV39A0A0B4J263 110 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 ANKUB1A6NFN9 424 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 SCDO00767 359 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 CD55P08174 381 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 MMP9P14780 707 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 RANP62826 216 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 HIST1H3AP68431 136 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 RPL19P84098 196 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 ZFP36L1Q07352 338 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 ENDOGQ14249 297 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 EIPR1Q53HC9 387 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 PATE1Q8WXA2 126 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 DCBLD2Q96PD2 775 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 RTBDNQ9BSG5 229 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF581Q9P0T4 197 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 LAMP3Q9UQV4 416 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 RNF24Q9Y225 148 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 RFNGQ9Y644 331 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 GPR179Q6PRD1 2367 aa8.32□□□□□ -1.08
CTNNA1-243ENST00000540387 BLKP51451 505 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 NXPH1P58417 271 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 TEX43Q6ZNM6 134 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 Q6ZVH6 145 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 SLC16A9Q7RTY1 509 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF619Q8N2I2 560 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 OR4C5Q8NGB2 326 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 ADAMTS18Q8TE60 1221 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 CNRIP1Q96F85 164 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 LRRC61Q9BV99 259 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF700Q9H0M5 742 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF319Q9P2F9 582 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 THADAQ6YHU6 1953 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 DCDC2BA2VCK2 349 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 SMPD2O60906 423 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 NDUFB2O95178 105 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 SCGB1D2O95969 90 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 NGFRP08138 427 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 SP9P0CG40 484 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 TUBG1P23258 451 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 DTYMKP23919 212 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 PNRC1Q12796 327 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 LPAL2Q16609 132 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 PRSS8Q16651 343 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 TMEM225Q6GV28 225 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 C1orf122Q6ZSJ8 110 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 WDFY1Q8IWB7 410 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 SLC16A11Q8NCK7 471 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 OR8G5Q8NG78 346 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 ADAMTS15Q8TE58 950 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 KCNE4Q8WWG9 221 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 TOMM40LQ969M1 308 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 FGGYQ96C11 551 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 RASD2Q96D21 266 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 KTI12Q96EK9 354 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 PYGO2Q9BRQ0 406 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 PCGF1Q9BSM1 259 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 CKLFQ9UBR5 152 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 FUT9Q9Y231 359 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 TDRD6O60522 2096 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 CACNA1HO95180 2353 aa8.31□□□□□ -1.08
CTNNA1-243ENST00000540387 FEZF1A0PJY2 475 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 CEACAM18A8MTB9 384 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 F6UZH7 168 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 J3QW42 95 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 NDUFS4O43181 175 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 NUDT21O43809 227 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 PFN1P07737 140 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 TMEM225BP0DP42 221 aa8.3□□□□□ -1.08
CTNNA1-243ENST00000540387 CD33P20138 364 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms