RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 A0A1B0GTI1 187 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 A6NIN4 97 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 C17orf98A8MV24 154 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 VGLL3A8MV65 326 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 M0R129 80 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 F2RL2O00254 374 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 MAGEB4O15481 346 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-211ENST00000539843 MITFO75030 526 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-211ENST00000539843 FBXO24O75426 580 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 OPN1MWP04001 364 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 OPN1MW2P0DN77 364 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 OPN1MW3P0DN78 364 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 HTR1FP30939 366 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 ARHGDIBP52566 201 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 ATP1B3P54709 279 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 MEF2CQ06413 473 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-211ENST00000539843 PLA1AQ53H76 456 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 KDM4DQ6B0I6 523 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 EGFL6Q8IUX8 553 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 C11orf44Q8N8P7 122 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 OR8J1Q8NGP2 316 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 CAPSLQ8WWF8 208 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 PP6455Q8WZ26 134 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 SLC7A6OSQ96CW6 309 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-211ENST00000539843 SNX22Q96L94 193 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 MYCBPQ99417 103 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-211ENST00000539843 PRSS22Q9GZN4 317 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 GABARAPL1Q9H0R8 117 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 TCF19Q9Y242 345 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 SIGLEC9Q9Y336 463 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 AP4S1Q9Y587 144 aa12.41□□□□□ -0.42
UBE3B-211ENST00000539843 TET2Q6N021 2002 aaPredicted RBP12.4□□□□□ -0.42
UBE3B-211ENST00000539843 FUOMA2VDF0 154 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 XPNPEP2O43895 674 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 GABRR1P24046 479 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 RBP2P50120 134 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 CDC42P60953 191 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 ERVK11-1P61568 191 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 EMX1Q04741 257 aaPredicted RBP12.4□□□□□ -0.42
UBE3B-211ENST00000539843 IL18R1Q13478 541 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 EDDM3AQ14507 147 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 SSX2Q16385 188 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 C1orf146Q5VVC0 180 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 Q6ZSR3 168 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 SLC25A26Q70HW3 274 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 TRAPPC6BQ86SZ2 158 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 CATSPERDQ86XM0 798 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 ZNF676Q8N7Q3 588 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 NDNFQ8TB73 568 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 SLAMF9Q96A28 289 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 CADM1Q9BY67 442 aaKnown RBP12.4□□□□□ -0.42
UBE3B-211ENST00000539843 RIBC2Q9H4K1 309 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 IMPAD1Q9NX62 359 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 GNG8Q9UK08 70 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 FOXJ3Q9UPW0 622 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 ORC6Q9Y5N6 252 aa12.4□□□□□ -0.42
UBE3B-211ENST00000539843 A0A1W2PQL4 384 aaPredicted RBP12.39□□□□□ -0.43
UBE3B-211ENST00000539843 SNTNA6NMZ2 147 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 CIB2O75838 187 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 ATP5HO75947 161 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 INMTO95050 263 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 HAND1O96004 215 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 IGHV1-8P0DP01 117 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 ZNF20P17024 532 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 PRKACBP22694 351 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 ACTC1P68032 377 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 ACTA1P68133 377 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 SLC34A1Q06495 639 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 GRK1Q15835 563 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 MINOS1Q5TGZ0 78 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 TMEM244Q5VVB8 128 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 ZNF626Q68DY1 528 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 REC114Q7Z4M0 266 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 LHFPL4Q7Z7J7 247 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 C11orf42Q8N5U0 333 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 OR4F17Q8NGA8 305 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 OR11H6Q8NGC7 330 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 CFHR4Q92496 578 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 MRPL48Q96GC5 212 aaKnown RBP12.39□□□□□ -0.43
UBE3B-211ENST00000539843 AKR1E2Q96JD6 320 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 OR4F4Q96R69 305 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 OSBPL10Q9BXB5 764 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 LINC00312Q9Y6C7 94 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 SESN1Q9Y6P5 492 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 MINOS1-NBL1R4GNA1 71 aa12.39□□□□□ -0.43
UBE3B-211ENST00000539843 NOTCH1P46531 2555 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 LOC107986453A0A1B0GWG9 222 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 FAM90A8PA6NJQ4 464 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 ODF3BA8MYP8 253 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 H3BSH0 61 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 DYNC1I1O14576 645 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 CHST1O43916 411 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 ZNF737O75373 536 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 AZGP1P25311 298 aaKnown RBP12.38□□□□□ -0.43
UBE3B-211ENST00000539843 POU3F4P49335 361 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 DYNLT3P51808 116 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 ACTA2P62736 377 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 ACTG2P63267 376 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 EFNB1P98172 346 aa12.38□□□□□ -0.43
UBE3B-211ENST00000539843 UBE2V2Q15819 145 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms