RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SRSF7Q16629 238 aaKnown RBP eCLIP11.54□□□□□ -0.56
UBE3B-209ENST00000539584 TMEM42Q69YG0 159 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 BORCS8Q96FH0 119 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 MARS2Q96GW9 593 aaKnown RBP11.54□□□□□ -0.56
UBE3B-209ENST00000539584 OR6C1Q96RD1 312 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 SPIN2AQ99865 258 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 SPIN2BQ9BPZ2 258 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 FAAP24Q9BTP7 215 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 RSRP1Q9BUV0 290 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 HIPK2Q9H2X6 1198 aa11.54□□□□□ -0.56
UBE3B-209ENST00000539584 NXT1Q9UKK6 140 aaKnown RBP11.54□□□□□ -0.56
UBE3B-209ENST00000539584 NME2P1O60361 137 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 OPN1LWP04000 364 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 ID4P47928 161 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 SULT1A1P50225 295 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 TAF9Q16594 264 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 C20orf196Q8IYI0 205 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 GPR137CQ8N3F9 429 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 OR4D5Q8NGN0 318 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 TOMM40LQ969M1 308 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 RBM24Q9BX46 236 aaKnown RBP11.53□□□□□ -0.56
UBE3B-209ENST00000539584 ULBP2Q9BZM5 246 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 MRPS17Q9Y2R5 130 aaKnown RBP11.53□□□□□ -0.56
UBE3B-209ENST00000539584 FER1L5A0AVI2 2057 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 DUXBA0A1W2PPF3 345 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 C5orf63A6NC05 138 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 MASP2O00187 686 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 HSPA12AO43301 675 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 FABP1P07148 127 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 CD63P08962 238 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 CST2P09228 141 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 MMP9P14780 707 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 Q6ZS49 121 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 LYZL2Q7Z4W2 148 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 OSR2Q8N2R0 312 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 TMEM156Q8N614 296 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 HPSE2Q8WWQ2 592 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 REEP6Q96HR9 211 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 GNRHR2Q96P88 292 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 HDHD3Q9BSH5 251 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-209ENST00000539584 DUSP23Q9BVJ7 150 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 SLC25A31Q9H0C2 315 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 OR51M1Q9H341 326 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 WDR54Q9H977 334 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 GPR173Q9NS66 373 aa11.53□□□□□ -0.56
UBE3B-209ENST00000539584 ARID1BQ8NFD5 2236 aaPredicted RBP11.53□□□□□ -0.56
UBE3B-209ENST00000539584 ADAMTS20P59510 1910 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A10PA6NDY2 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A18PA6NE21 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A16PA6NEW6 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A20PA6NIJ5 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A8PA6NJQ4 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A7PA6NKC0 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A22PA8MWA6 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A12PA8MX19 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A5PA8MXJ8 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A23PA8MXZ1 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 K7N7A8 449 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 AP4M1O00189 453 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 BCAT2O15382 392 aaPredicted RBP11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A15PP0C7V4 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A13PP0C7W8 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A14PP0C7W9 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM90A24PP0C7X0 464 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FUT6P51993 359 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FABP9Q0Z7S8 132 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 KRBOX4Q5JUW0 171 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 NANPQ8TBE9 248 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 LIME1Q9H400 295 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 WFDC1Q9HC57 220 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 FAM86C1Q9NVL1 165 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 TCFL5Q9UL49 500 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 SLC7A11Q9UPY5 501 aa11.52□□□□□ -0.56
UBE3B-209ENST00000539584 LOC102723996A0A087X1L8 192 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 PDCD6O75340 191 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 TCN2P20062 427 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 FOXL2P58012 376 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 HERV-K104P61576 105 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 RAC1P63000 192 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 MALLQ13021 153 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 KRTAP27-1Q3LI81 207 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 SOHLH1Q5JUK2 328 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 PHYHD1Q5SRE7 291 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 ZNF574Q6ZN55 896 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-209ENST00000539584 OR2C3Q8N628 320 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 OR14L1PQ8NHC6 308 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 BOD1Q96IK1 185 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 IP6K3Q96PC2 410 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 ZNF385AQ96PM9 386 aaKnown RBP11.52□□□□□ -0.57
UBE3B-209ENST00000539584 MESP1Q9BRJ9 268 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 TMPRSS5Q9H3S3 457 aa11.52□□□□□ -0.57
UBE3B-209ENST00000539584 RALGAPA1Q6GYQ0 2036 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 A0A087WWC5 75 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 MSTNO14793 375 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 SYNGR3O43761 229 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 PITX3O75364 302 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 NRASP01111 189 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 EIF2S3P41091 472 aaKnown RBP11.51□□□□□ -0.57
UBE3B-209ENST00000539584 RGS19P49795 217 aa11.51□□□□□ -0.57
UBE3B-209ENST00000539584 RND3P61587 244 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms