RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SGPP2Q8IWX5 399 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 BAP18Q8IXM2 172 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 ZBTB44Q8NCP5 570 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 OR1S2Q8NGQ3 325 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 STOML3Q8TAV4 291 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 FAM117AQ9C073 453 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 DNTTIP1Q9H147 329 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 ASF1BQ9NVP2 202 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 C1orf123Q9NWV4 160 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 B4GALT7Q9UBV7 327 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 PCDHB10Q9UN67 800 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 FRYQ5TBA9 3013 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 RBM39Q14498 530 aaKnown RBP21.54■■□□□ 1.04
RAB40C-204ENST00000538492 FNDC9Q8TBE3 224 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 NECAP2Q9NVZ3 263 aa21.54■■□□□ 1.04
RAB40C-204ENST00000538492 HLA-HP01893 362 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 PLEKHN1Q494U1 663 aaPredicted RBP21.53■■□□□ 1.04
RAB40C-204ENST00000538492 DCAF10Q5QP82 559 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 TMED6Q8WW62 240 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 C1QTNF5Q9BXJ0 243 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 TTTY12Q9BZ98 90 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 BCO1Q9HAY6 547 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 FAM186AA6NE01 2351 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 XRCC2O43543 280 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 CTSDP07339 412 aaPredicted RBP21.53■■□□□ 1.04
RAB40C-204ENST00000538492 SP9P0CG40 484 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 ARHGDIBP52566 201 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 FXYD4P59646 89 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 AIMP2Q13155 320 aaKnown RBP21.53■■□□□ 1.04
RAB40C-204ENST00000538492 TMEM164Q5U3C3 297 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 NARS2Q96I59 477 aaKnown RBP21.53■■□□□ 1.04
RAB40C-204ENST00000538492 OR2S2Q9NQN1 319 aa21.53■■□□□ 1.04
RAB40C-204ENST00000538492 IGKV3D-15A0A087WSY6 115 aa21.52■■□□□ 1.04
RAB40C-204ENST00000538492 LYL1P12980 280 aa21.52■■□□□ 1.04
RAB40C-204ENST00000538492 ECI1P42126 302 aa21.52■■□□□ 1.04
RAB40C-204ENST00000538492 IL15RAQ13261 267 aa21.52■■□□□ 1.04
RAB40C-204ENST00000538492 IAH1Q2TAA2 248 aaPredicted RBP21.52■■□□□ 1.04
RAB40C-204ENST00000538492 ZNF585AQ6P3V2 769 aa21.52■■□□□ 1.04
RAB40C-204ENST00000538492 SLC22A25Q6T423 547 aa21.52■■□□□ 1.04
RAB40C-204ENST00000538492 CD59P13987 128 aa21.52■■□□□ 1.04
RAB40C-204ENST00000538492 DTYMKP23919 212 aa21.52■■□□□ 1.04
RAB40C-204ENST00000538492 PIGPP57054 158 aa21.52■■□□□ 1.04
RAB40C-204ENST00000538492 SLC25A26Q70HW3 274 aa21.52■■□□□ 1.04
RAB40C-204ENST00000538492 ZNF611Q8N823 705 aa21.52■■□□□ 1.04
RAB40C-204ENST00000538492 BPIFCQ8NFQ6 507 aa21.52■■□□□ 1.04
RAB40C-204ENST00000538492 DOCK7Q96N67 2140 aa21.52■■□□□ 1.03
RAB40C-204ENST00000538492 CRYM-AS1A6NIL9 109 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 LINC01387J3KSC0 135 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 NUPL2O15504 423 aaKnown RBP21.51■■□□□ 1.03
RAB40C-204ENST00000538492 NPBWR2P48146 333 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 C3AR1Q16581 482 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 SLC30A7Q8NEW0 376 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 PRDM14Q9GZV8 571 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 SP6Q3SY56 376 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 ATRAIDQ6UW56 229 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 AQP10Q96PS8 301 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 GPR87Q9BY21 358 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 PRRG4Q9BZD6 226 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 DECR2Q9NUI1 292 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 SHANK1Q9Y566 2161 aa21.51■■□□□ 1.03
RAB40C-204ENST00000538492 C5orf49A4QMS7 147 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 ZNF503-AS2A6NEH8 195 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 PET100P0DJ07 73 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 SPSB4Q96A44 273 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 PAPOLGQ9BWT3 736 aaKnown RBP21.5■■□□□ 1.03
RAB40C-204ENST00000538492 IL17BQ9UHF5 180 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 OR7C1O76099 320 aaPredicted RBP21.5■■□□□ 1.03
RAB40C-204ENST00000538492 SYNGR4O95473 234 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 GLI4P10075 376 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 ZNF708P17019 499 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 PLGLB1Q02325 96 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 DHRS11Q6UWP2 260 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 OR56B2PQ8NGI1 322 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 MRPL24Q96A35 216 aaKnown RBP21.5■■□□□ 1.03
RAB40C-204ENST00000538492 PARPBPQ9NWS1 579 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 IL36GQ9NZH8 169 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 CRIM1Q9NZV1 1036 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 ABI3Q9P2A4 366 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 MEMO1Q9Y316 297 aa21.5■■□□□ 1.03
RAB40C-204ENST00000538492 ZNF728P0DKX0 622 aa21.49■■□□□ 1.03
RAB40C-204ENST00000538492 AKR1C2P52895 323 aa21.49■■□□□ 1.03
RAB40C-204ENST00000538492 RBM11P57052 281 aaKnown RBP21.49■■□□□ 1.03
RAB40C-204ENST00000538492 AKR1C1Q04828 323 aa21.49■■□□□ 1.03
RAB40C-204ENST00000538492 TMEM251Q8N6I4 163 aa21.49■■□□□ 1.03
RAB40C-204ENST00000538492 FCGR2CP31995 323 aa21.49■■□□□ 1.03
RAB40C-204ENST00000538492 NAAAQ02083 359 aa21.49■■□□□ 1.03
RAB40C-204ENST00000538492 MALLQ13021 153 aa21.49■■□□□ 1.03
RAB40C-204ENST00000538492 Q6ZPA2 131 aa21.49■■□□□ 1.03
RAB40C-204ENST00000538492 MARC2Q969Z3 335 aa21.49■■□□□ 1.03
RAB40C-204ENST00000538492 ZNF442Q9H7R0 627 aa21.49■■□□□ 1.03
RAB40C-204ENST00000538492 C21orf140B9A014 251 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 PDCD6O75340 191 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 DEFA5Q01523 94 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 NRN1LQ496H8 165 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 ABCA11PQ4W5N1 156 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 PHLDA2Q53GA4 152 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 COLCA1Q6ZS62 124 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 SPERTQ8NA61 448 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 LINC00470Q9BZP3 86 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 SLC5A7Q9GZV3 580 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms