RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 RYR2Q92736 4967 aa11.17□□□□□ -0.62
SMARCA4-206ENST00000538456 ACOD1A6NK06 481 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 PRR32B1ATL7 298 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 ANKRD65E5RJM6 399 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 PRODHO43272 600 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 INMTO95050 263 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 IGLV3-1P01715 115 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 MRPL3P09001 348 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 HTR1DP28221 377 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 IL18R1Q13478 541 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 C9orf152Q5JTZ5 239 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 CLVS2Q5SYC1 327 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 OR2T5Q6IEZ7 315 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 C16orf82Q7Z2V1 217 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 CPOQ8IVL8 374 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 OR8H2Q8N162 312 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 OR2T29Q8NH02 315 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 TRMT10AQ8TBZ6 339 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 STMN2Q93045 179 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 FEVQ99581 238 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 MROQ9BYG7 248 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 TMEM133Q9H2Q1 129 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 U3KQK5 164 aa11.16□□□□□ -0.62
SMARCA4-206ENST00000538456 KIAA2026Q5HYC2 2103 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 hADV38S2A0JD32 116 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 B2RBV5 119 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 F8VVB4 439 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 F8VWA3 439 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 TTRP02766 147 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 MPZP25189 248 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 ERVK11-1P61568 191 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 DCTN2Q13561 401 aaKnown RBP11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 GINS1Q14691 196 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 ZNF829Q3KNS6 432 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 DNAL1Q4LDG9 190 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 KCTD18Q6PI47 426 aaPredicted RBP11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 CD300LDQ6UXZ3 194 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 DEFB107AQ8IZN7 70 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 OR4P4Q8NGL7 312 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 CHST6Q9GZX3 395 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 NUFIP1Q9UHK0 495 aaKnown RBP11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 IKZF2Q9UKS7 526 aa11.15□□□□□ -0.62
SMARCA4-206ENST00000538456 FAM230AA0A1W2PPH8 454 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 TMEM82A0PJX8 343 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 FAM172BPA6NC97 362 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 DLGAP1O14490 977 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 GYG2O15488 501 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 MMP23AO75900 390 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 IGHA1P01876 353 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 AMY1AP04745 511 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 AMY2AP04746 511 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 BRS3P32247 399 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 MEF2CQ06413 473 aaPredicted RBP11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 IL24Q13007 206 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 APOFQ13790 326 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 LCN1P1Q5VSP4 162 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 TMEM42Q69YG0 159 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 DEGS2Q6QHC5 323 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 BAIAP2L2Q6UXY1 529 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 TRAPPC6BQ86SZ2 158 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 OSR2Q8N2R0 312 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 OR51D1Q8NGF3 324 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 TFAP2CQ92754 450 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 ITFG2Q969R8 447 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 SLAMF9Q96A28 289 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 CEP19Q96LK0 163 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 YIPF3Q9GZM5 350 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 NDE1Q9NXR1 346 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 LINC00312Q9Y6C7 94 aa11.14□□□□□ -0.63
SMARCA4-206ENST00000538456 TCRBV5S2A0A599 114 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 PSMB11A5LHX3 300 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 NUDT19A8MXV4 375 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 OR2F2O95006 317 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 SLC2A5P22732 501 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 GABRR1P24046 479 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 LMO1P25800 156 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 THBS3P49746 956 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 RIDAP52758 137 aaKnown RBP11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 GRK1Q15835 563 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 SLC35D3Q5M8T2 416 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 BCL2L15Q5TBC7 163 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 PRAMEF5Q5TYX0 476 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 PLEKHG7Q6ZR37 379 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 ZBTB49Q6ZSB9 765 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 C18orf65Q6ZTR6 163 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 C8orf86Q6ZUL3 223 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 ZNF329Q86UD4 541 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 ZNF679Q8IYX0 411 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 GIPC3Q8TF64 312 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 SNX22Q96L94 193 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 RBM14Q96PK6 669 aaKnown RBP11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 MCRIP2Q9BUT9 160 aaKnown RBP11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 CADM1Q9BY67 442 aaKnown RBP11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 PKIBQ9C010 78 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 MAGIXQ9H6Y5 334 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 MTCH1Q9NZJ7 389 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 ACTR3BQ9P1U1 418 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 DPM3Q9P2X0 92 aa11.13□□□□□ -0.63
SMARCA4-206ENST00000538456 IL36RNQ9UBH0 155 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms