RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SCGB3A2Q96PL1 93 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 HS3ST6Q96QI5 342 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 TTTY12Q9BZ98 90 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 FANCFQ9NPI8 374 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 KIF25Q9UIL4 384 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 KCNMB2Q9Y691 235 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 CUL9Q8IWT3 2517 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 EXPH5Q8NEV8 1989 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 PHF1O43189 567 aaPredicted RBP7.55□□□□□ -1.2
UBE3B-208ENST00000538070 NEURL1O76050 574 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 TPPPO94811 219 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 SP9P0CG40 484 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 TDGF1P13385 188 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 MEOX1P50221 254 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 FAM3AP98173 230 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 IGSF11Q5DX21 431 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 AADACL3Q5VUY0 350 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 HAGHLQ6PII5 290 aaPredicted RBP7.55□□□□□ -1.2
UBE3B-208ENST00000538070 P4HA3Q7Z4N8 544 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 ARRDC1Q8N5I2 433 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 KCNRGQ8N5I3 272 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 CNEP1R1Q8N9A8 125 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 OR10AD1Q8NGE0 317 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 CPT1CQ8TCG5 803 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 CPNE4Q96A23 557 aaPredicted RBP7.55□□□□□ -1.2
UBE3B-208ENST00000538070 APH1AQ96BI3 265 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 PRSS50Q9UI38 385 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 PCDHB10Q9UN67 800 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 STARD10Q9Y365 291 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 FAM96BQ9Y3D0 163 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 LIPGQ9Y5X9 500 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 A0A1B0GW55 424 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF732B4DXR9 585 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 B4E171 279 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 F8VVB4 439 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 F8VWA3 439 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 B3GALNT1O75752 331 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 OR2F2O95006 317 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 IFNA2P01563 188 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 IGHEP01854 428 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 DUX4L2P0CJ85 424 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 DUX4L3P0CJ86 424 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 DUX4L4P0CJ87 422 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 DUX4L5P0CJ88 424 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 DUX4L6P0CJ89 424 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 DUX4L7P0CJ90 424 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF16P17020 682 aaPredicted RBP7.55□□□□□ -1.2
UBE3B-208ENST00000538070 PRKACBP22694 351 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 TSPAN7P41732 249 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 ID4P47928 161 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 SUPT4H1P63272 117 aaKnown RBP7.55□□□□□ -1.2
UBE3B-208ENST00000538070 PLP2Q04941 152 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 OR2F1Q13607 317 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 HNF4GQ14541 408 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 OR2T2Q6IF00 324 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 RPUSD3Q6P087 351 aaKnown RBP7.55□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF529Q6P280 563 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 NUFIP2Q7Z417 695 aaKnown RBP7.55□□□□□ -1.2
UBE3B-208ENST00000538070 FAM173AQ9BQD7 235 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 C12orf4Q9NQ89 552 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 DUX4Q9UBX2 424 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 ANXA10Q9UJ72 324 aa7.55□□□□□ -1.2
UBE3B-208ENST00000538070 CST2P09228 141 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 OR5AC1P0C628 307 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 BCL3P20749 454 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 FPR2P25090 351 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 CEBPGP53567 150 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 PCBD1P61457 104 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 RPL7L1Q6DKI1 246 aaKnown RBP7.54□□□□□ -1.2
UBE3B-208ENST00000538070 BPIFCQ8NFQ6 507 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 RTN4IP1Q8WWV3 396 aaPredicted RBP7.54□□□□□ -1.2
UBE3B-208ENST00000538070 MAGT1Q9H0U3 335 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 V9GYS6 101 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 PKDREJQ9NTG1 2253 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 NCKAP5O14513 1909 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 SPAARA0A1B0GVQ0 90 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 OR6C6A6NF89 314 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 MFSD2BA6NFX1 497 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 SERPINE3A8MV23 424 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 EPHA1P21709 976 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 GLP1RP43220 463 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 CBX5P45973 191 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 DHODHQ02127 395 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 STK11Q15831 433 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 FAM189A2Q15884 450 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 PNLIPRP3Q17RR3 467 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 LPCAT3Q6P1A2 487 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 LYZL2Q7Z4W2 148 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 MYPOPQ86VE0 399 aaPredicted RBP7.54□□□□□ -1.2
UBE3B-208ENST00000538070 CXorf67Q86X51 503 aaPredicted RBP7.54□□□□□ -1.2
UBE3B-208ENST00000538070 RNASE11Q8TAA1 199 aaKnown RBP7.54□□□□□ -1.2
UBE3B-208ENST00000538070 INTS12Q96CB8 462 aaKnown RBP7.54□□□□□ -1.2
UBE3B-208ENST00000538070 OCSTAMPQ9BR26 566 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 LUZP4Q9P127 313 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 KCNIP3Q9Y2W7 256 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF503-AS2A6NEH8 195 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 HSD17B6O14756 317 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 ONECUT2O95948 504 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF44P15621 663 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 PRKACAP17612 351 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms