RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 FAM58AQ8N1B3 248 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 C19orf18Q8NEA5 215 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 FAM168AQ92567 244 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 HMG20AQ9NP66 347 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 PCDHB16Q9NRJ7 776 aa20.33■□□□□ 0.85
HMGA2-208ENST00000537429 VPS13CQ709C8 3753 aa20.33■□□□□ 0.84
HMGA2-208ENST00000537429 HTR3BO95264 441 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 CSF3P09919 207 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 FGF12P61328 243 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 BTG1P62324 171 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 TMEM104Q8NE00 496 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 EMG1Q92979 244 aaKnown RBP20.32■□□□□ 0.84
HMGA2-208ENST00000537429 TIMD4Q96H15 378 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 KCNK15Q9H427 330 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 WIPI2Q9Y4P8 454 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 NOTCH2Q04721 2471 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 OOEPA6NGQ2 149 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 TMEM14DPA8MWL7 114 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 LGALS8O00214 317 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 NDUFS8O00217 210 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 LDLRAD4O15165 306 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 CALCBP10092 127 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 MUC1P15941 1255 aaPredicted RBP20.32■□□□□ 0.84
HMGA2-208ENST00000537429 ZNF182P17025 639 aaPredicted RBP20.32■□□□□ 0.84
HMGA2-208ENST00000537429 BMXP51813 675 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 CAPZA1P52907 286 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 ZMYND11Q15326 602 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 CLEC12BQ2HXU8 276 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 SMIM21Q3B7S5 101 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 Q5PR19 223 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 OR10K2Q6IF99 312 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 FAM90A1Q86YD7 464 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 RAB1CQ92928 201 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 MRPS24Q96EL2 167 aaKnown RBP20.32■□□□□ 0.84
HMGA2-208ENST00000537429 MRI1Q9BV20 369 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 CST11Q9H112 138 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 FBLN5Q9UBX5 448 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 OR5V1Q9UGF6 321 aa20.32■□□□□ 0.84
HMGA2-208ENST00000537429 PAHP00439 452 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 IGHV2-70P01814 119 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 GTF2F2P13984 249 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 SNRPBP14678 240 aaKnown RBP20.31■□□□□ 0.84
HMGA2-208ENST00000537429 PRKACAP17612 351 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 GPR6P46095 362 aaPredicted RBP20.31■□□□□ 0.84
HMGA2-208ENST00000537429 DSCR9P59020 149 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 UNC119Q13432 240 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 MICBQ29980 383 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 OR2W3Q7Z3T1 314 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 OSR2Q8N2R0 312 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 OR51T1Q8NGJ9 327 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 KCNG3Q8TAE7 436 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 C10orf105Q8TEF2 133 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 KCTD12Q96CX2 325 aaKnown RBP20.31■□□□□ 0.84
HMGA2-208ENST00000537429 TMEM165Q9HC07 324 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 ABRACLQ9P1F3 81 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 NLKQ9UBE8 527 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 IL36RNQ9UBH0 155 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 DNAJB11Q9UBS4 358 aa20.31■□□□□ 0.84
HMGA2-208ENST00000537429 IGHV3OR15-7A0A075B7D8 119 aa20.3■□□□□ 0.84
HMGA2-208ENST00000537429 TRAV38-1A0A0B4J264 116 aa20.3■□□□□ 0.84
HMGA2-208ENST00000537429 SOX6P35712 828 aa20.3■□□□□ 0.84
HMGA2-208ENST00000537429 SCAND1P57086 179 aa20.3■□□□□ 0.84
HMGA2-208ENST00000537429 AVPI1Q5T686 147 aa20.3■□□□□ 0.84
HMGA2-208ENST00000537429 PRSS57Q6UWY2 283 aa20.3■□□□□ 0.84
HMGA2-208ENST00000537429 LRRC28Q86X40 367 aaPredicted RBP20.3■□□□□ 0.84
HMGA2-208ENST00000537429 DEFB108BQ8NET1 73 aa20.3■□□□□ 0.84
HMGA2-208ENST00000537429 FAM46BQ96A09 425 aa20.3■□□□□ 0.84
HMGA2-208ENST00000537429 PIMREGQ9BSJ6 248 aa20.3■□□□□ 0.84
HMGA2-208ENST00000537429 BANF2Q9H503 90 aa20.3■□□□□ 0.84
HMGA2-208ENST00000537429 CCDC59Q9P031 241 aaKnown RBP20.3■□□□□ 0.84
HMGA2-208ENST00000537429 ITGB1BP2Q9UKP3 347 aa20.3■□□□□ 0.84
HMGA2-208ENST00000537429 TMEM272A0A1B0GTI8 110 aa20.29■□□□□ 0.84
HMGA2-208ENST00000537429 ISPDA4D126 451 aa20.29■□□□□ 0.84
HMGA2-208ENST00000537429 CRTAPO75718 401 aaPredicted RBP20.29■□□□□ 0.84
HMGA2-208ENST00000537429 KNG1P01042 644 aa20.29■□□□□ 0.84
HMGA2-208ENST00000537429 MGMTP16455 207 aa20.29■□□□□ 0.84
HMGA2-208ENST00000537429 ART1P52961 327 aa20.29■□□□□ 0.84
HMGA2-208ENST00000537429 ZNF146Q15072 292 aa20.29■□□□□ 0.84
HMGA2-208ENST00000537429 ZNF404Q494X3 552 aa20.29■□□□□ 0.84
HMGA2-208ENST00000537429 NHLRC3Q5JS37 347 aa20.29■□□□□ 0.84
HMGA2-208ENST00000537429 OR5T2Q8NGG2 359 aa20.29■□□□□ 0.84
HMGA2-208ENST00000537429 FOXC2Q99958 501 aa20.29■□□□□ 0.84
HMGA2-208ENST00000537429 DCUN1D5Q9BTE7 237 aa20.29■□□□□ 0.84
HMGA2-208ENST00000537429 BPESC1Q9GZL8 116 aa20.29■□□□□ 0.84
HMGA2-208ENST00000537429 OR2AT4A6NND4 320 aa20.28■□□□□ 0.84
HMGA2-208ENST00000537429 MPIG6BO95866 241 aa20.28■□□□□ 0.84
HMGA2-208ENST00000537429 PSG2P11465 335 aa20.28■□□□□ 0.84
HMGA2-208ENST00000537429 MDH2P40926 338 aaKnown RBP20.28■□□□□ 0.84
HMGA2-208ENST00000537429 STUMQ69YW2 141 aa20.28■□□□□ 0.84
HMGA2-208ENST00000537429 KRTAP1-3Q8IUG1 177 aa20.28■□□□□ 0.84
HMGA2-208ENST00000537429 LGALS14Q8TCE9 139 aa20.28■□□□□ 0.84
HMGA2-208ENST00000537429 SLIRPQ9GZT3 109 aaKnown RBP20.28■□□□□ 0.84
HMGA2-208ENST00000537429 SPATA2Q9UM82 520 aa20.28■□□□□ 0.84
HMGA2-208ENST00000537429 ST3GAL6Q9Y274 331 aa20.28■□□□□ 0.84
HMGA2-208ENST00000537429 RFPL4AA6NLU0 287 aa20.27■□□□□ 0.84
HMGA2-208ENST00000537429 VWC2LB2RUY7 222 aa20.27■□□□□ 0.84
HMGA2-208ENST00000537429 RFPL4AL1F8VTS6 287 aa20.27■□□□□ 0.84
HMGA2-208ENST00000537429 TNFRSF13BO14836 293 aaPredicted RBP20.27■□□□□ 0.84
HMGA2-208ENST00000537429 RBM11P57052 281 aaKnown RBP20.27■□□□□ 0.84
HMGA2-208ENST00000537429 PLA2G7Q13093 441 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms