RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 H3BQF6 201 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 K7EQG2 157 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 PEX11AO75192 247 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 LYPLA1O75608 230 aaPredicted RBP4.03□□□□□ -1.76
CLIP1-207ENST00000536634 IGHV1-69P01742 117 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 DBIP07108 87 aaKnown RBP4.03□□□□□ -1.76
CLIP1-207ENST00000536634 CHRNGP07510 517 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 MMP7P09237 267 aaPredicted RBP4.03□□□□□ -1.76
CLIP1-207ENST00000536634 ADORA3P0DMS8 318 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 IDO1P14902 403 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 NCF2P19878 526 aaPredicted RBP4.03□□□□□ -1.76
CLIP1-207ENST00000536634 CSNK1A1P48729 337 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 PITPNBP48739 271 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 ERFP50548 548 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 PSMD7P51665 324 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 EFNB2P52799 333 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 BPIFB3P59826 476 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 DNAJB13P59910 316 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 COPZ1P61923 177 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 PRB3Q04118 309 aaPredicted RBP4.03□□□□□ -1.76
CLIP1-207ENST00000536634 PSG7Q13046 419 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 MOGQ16653 247 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 LRRC23Q53EV4 343 aaPredicted RBP4.03□□□□□ -1.76
CLIP1-207ENST00000536634 CFAP157Q5JU67 520 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 FAM201AQ5SY85 155 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 ZNF770Q6IQ21 691 aaPredicted RBP4.03□□□□□ -1.76
CLIP1-207ENST00000536634 SLC27A4Q6P1M0 643 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 TMEM53Q6P2H8 277 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 TRAT1Q6PIZ9 186 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 REG3GQ6UW15 175 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 LYPD2Q6UXB3 125 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 LRRC74BQ6ZQY2 392 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 PIWIL3Q7Z3Z3 882 aaKnown RBP4.03□□□□□ -1.76
CLIP1-207ENST00000536634 NATD1Q8N6N6 113 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 OR2Z1Q8NG97 314 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 LHX4Q969G2 390 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 TMEM54Q969K7 222 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 CCDC126Q96EE4 140 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 SLC41A3Q96GZ6 507 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 TRNT1Q96Q11 434 aaKnown RBP4.03□□□□□ -1.76
CLIP1-207ENST00000536634 B9D2Q9BPU9 175 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 RHOXF2Q9BQY4 288 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 TMEM246Q9BRR3 403 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 SLC35A5Q9BS91 424 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 DPY30Q9C005 99 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 MARCOQ9UEW3 520 aaPredicted RBP4.03□□□□□ -1.76
CLIP1-207ENST00000536634 VPREB3Q9UKI3 123 aa4.03□□□□□ -1.76
CLIP1-207ENST00000536634 ZNF443Q9Y2A4 671 aaPredicted RBP4.03□□□□□ -1.76
CLIP1-207ENST00000536634 TRAV36DV7A0A075B6V5 113 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 IGHV3-64DA0A0J9YX35 117 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 EXOC1LA0A1B0GW35 172 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 A0A1W2PRQ8 180 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 C5orf49A4QMS7 147 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 C5orf52A6NGY3 159 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 ZNF726A6NNF4 738 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 ZNF879B4DU55 563 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 C3orf84H3BNL1 204 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 TIMM8AO60220 97 aaPredicted RBP4.02□□□□□ -1.77
CLIP1-207ENST00000536634 FCN3O75636 299 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 CPSF4O95639 269 aaKnown RBP4.02□□□□□ -1.77
CLIP1-207ENST00000536634 BGLAPP02818 100 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 OPN1SWP03999 348 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 CD28P10747 220 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 NQO1P15559 274 aaKnown RBP4.02□□□□□ -1.77
CLIP1-207ENST00000536634 PRPS1L1P21108 318 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 UQCRC2P22695 453 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 STOMP27105 288 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 HTR2AP28223 471 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 APLNRP35414 380 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 RPL4P36578 427 aaKnown RBP4.02□□□□□ -1.77
CLIP1-207ENST00000536634 BIDP55957 195 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 DLX1P56177 255 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 PPP1CBP62140 327 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 SRPXP78539 464 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 PUDPQ08623 228 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 GNA13Q14344 377 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 ZNF404Q494X3 552 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 LIN52Q52LA3 116 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 TTMPQ5BVD1 217 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 PABPC1L2AQ5JQF8 200 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 CASC10Q5T4H9 136 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 WDR25Q64LD2 544 aaPredicted RBP4.02□□□□□ -1.77
CLIP1-207ENST00000536634 SLC16A14Q7RTX9 510 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 LCA5Q86VQ0 697 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 COMTD1Q86VU5 262 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 LRRC18Q8N456 261 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 FNDC5Q8NAU1 212 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 C19orf18Q8NEA5 215 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 OR8B3Q8NGG8 313 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 OR52P1PQ8NH57 321 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 AKR7LQ8NHP1 331 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 TYMSOSQ8TAI1 123 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 AGR3Q8TD06 166 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 LZICQ8WZA0 190 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 PPP1R14BQ96C90 147 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 TEX37Q96LM6 180 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 SAMD8Q96LT4 415 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 PPP3R2Q96LZ3 170 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 OR2V2Q96R30 315 aa4.02□□□□□ -1.77
CLIP1-207ENST00000536634 OR8B2Q96RD0 313 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms