RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 MMACHCQ9Y4U1 282 aa6.04□□□□□ -1.44
CPSF7-215ENST00000536145 LIPGQ9Y5X9 500 aa6.04□□□□□ -1.44
CPSF7-215ENST00000536145 WSB1Q9Y6I7 421 aa6.04□□□□□ -1.44
CPSF7-215ENST00000536145 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 KIR2DS5A0A0G2JLQ3 304 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 A0A0G2JNG1 304 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 CLEC18AA5D8T8 446 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 TRDCB7Z8K6 153 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 NPIPA5E9PKD4 350 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 H0Y8X5 98 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 H0YIG0 161 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 CLDN34H7C241 214 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 KIR2DS3K7RE56 304 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 CDS2O95674 445 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 GCGP01275 180 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 HBE1P02100 147 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 HCKP08631 526 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 ZNF728P0DKX0 622 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 MMP9P14780 707 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 COL9A1P20849 921 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 FUT3P21217 361 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 EPHA1P21709 976 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 AKT2P31751 481 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 NOVA1P51513 510 aaKnown RBP6.03□□□□□ -1.44
CPSF7-215ENST00000536145 CASP6P55212 293 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 PIGPP57054 158 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 TNFRSF9Q07011 255 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 PNRC1Q12796 327 aaPredicted RBP6.03□□□□□ -1.44
CPSF7-215ENST00000536145 HNF4GQ14541 408 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 KIR2DS5Q14953 304 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 OR8G1Q15617 311 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 SP6Q3SY56 376 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 PDZD11Q5EBL8 140 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 POMZP3Q6PJE2 187 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 FBXW12Q6X9E4 464 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 ASCL4Q6XD76 172 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 RD3Q7Z3Z2 195 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 SPRED2Q7Z698 418 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 OOSP2Q86WS3 158 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 C1orf87Q8N0U7 546 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 OR2C3Q8N628 320 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 TMEM252Q8N6L7 170 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 CLEC18CQ8NCF0 446 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 PLPP5Q8NEB5 264 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 OR1P1Q8NH06 330 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 PLPPR1Q8TBJ4 325 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 SLC37A2Q8TED4 501 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 CA5BP1Q8WTZ4 195 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 TMEM171Q8WVE6 324 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 MBD3L1Q8WWY6 194 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 R3HDM4Q96D70 268 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 RBMXL1Q96E39 390 aaKnown RBP6.03□□□□□ -1.44
CPSF7-215ENST00000536145 HDHD3Q9BSH5 251 aaPredicted RBP6.03□□□□□ -1.44
CPSF7-215ENST00000536145 SNHG12Q9BXW3 62 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 PLA2G2FQ9BZM2 168 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 CTDSP1Q9GZU7 261 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 TCEAL2Q9H3H9 227 aaPredicted RBP6.03□□□□□ -1.44
CPSF7-215ENST00000536145 PLEKHF2Q9H8W4 249 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 SDF2L1Q9HCN8 221 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 GLRX2Q9NS18 164 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 CISD1Q9NZ45 108 aaKnown RBP6.03□□□□□ -1.44
CPSF7-215ENST00000536145 B3GAT1Q9P2W7 334 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 AK3Q9UIJ7 227 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 VAX2Q9UIW0 290 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 NPIPA1Q9UND3 350 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 WASF3Q9UPY6 502 aa6.03□□□□□ -1.44
CPSF7-215ENST00000536145 KIR2DL5BA0A0G2JN68 375 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 KIR2DL5BA0A0G2JPC4 375 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 CDC14CA4D256 554 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 ANKUB1A6NFN9 424 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 LIPT2A6NK58 231 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 MARCH11A6NNE9 402 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 METTL12A8MUP2 240 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 PROB1E7EW31 1015 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 GEMIN2O14893 280 aaKnown RBP6.02□□□□□ -1.45
CPSF7-215ENST00000536145 PIAS2O75928 621 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 CRYABP02511 175 aaKnown RBP6.02□□□□□ -1.45
CPSF7-215ENST00000536145 OPN1MWP04001 364 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 QDPRP09417 244 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 OPN1MW2P0DN77 364 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 OPN1MW3P0DN78 364 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 RAB4AP20338 218 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 HNRNPA2B1P22626 353 aaKnown RBP6.02□□□□□ -1.45
CPSF7-215ENST00000536145 APLNRP35414 380 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 TNFRSF4P43489 277 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 MTCP1P56278 107 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 YPEL5P62699 121 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 RNF4P78317 190 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 SMAD4Q13485 552 aaKnown RBP6.02□□□□□ -1.45
CPSF7-215ENST00000536145 PMS2P11Q13670 270 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 ZNF266Q14584 549 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 SLC10A1Q14973 349 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 RNPS1Q15287 305 aaKnown RBP6.02□□□□□ -1.45
CPSF7-215ENST00000536145 KISS1Q15726 138 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 SLC25A53Q5H9E4 307 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 TMEM196Q5HYL7 178 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 AKR1C8PQ5T2L2 129 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 TANGO2Q6ICL3 276 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 Q6ZPA2 131 aa6.02□□□□□ -1.45
CPSF7-215ENST00000536145 FOXL2NBQ6ZUU3 175 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms