RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 MAB21L2Q9Y586 359 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 INSIG2Q9Y5U4 225 aa11.63□□□□□ -0.55
VPS11-205ENST00000534551 A0A0G2JMP0 313 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 A0A0X1KG70 313 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 NOS1APO75052 506 aaPredicted RBP11.62□□□□□ -0.55
VPS11-205ENST00000534551 SFTPBP07988 381 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 FSTP19883 344 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 GP2P55259 537 aaKnown RBP11.62□□□□□ -0.55
VPS11-205ENST00000534551 PPP3R1P63098 170 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 EMX1Q04741 257 aaPredicted RBP11.62□□□□□ -0.55
VPS11-205ENST00000534551 MLLT11Q13015 90 aaPredicted RBP11.62□□□□□ -0.55
VPS11-205ENST00000534551 PDZK1IP1Q13113 114 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 SSX1Q16384 188 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 C1QL2Q7Z5L3 287 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 SPARTQ8N0X7 666 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 TMEM185AQ8NFB2 350 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 OR4M2Q8NGB6 313 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 OR5D14Q8NGL3 314 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 OR10K1Q8NGX5 313 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 SHARPINQ9H0F6 387 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 KAAG1Q9UBP8 84 aa11.62□□□□□ -0.55
VPS11-205ENST00000534551 SIGLEC5O15389 551 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 MAS1P04201 325 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 CD1AP06126 327 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 CPEP16870 476 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 PRKACAP17612 351 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 PCMT1P22061 227 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 BDKRB2P30411 391 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 DLX1P56177 255 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 PRB3Q04118 309 aaPredicted RBP11.61□□□□□ -0.55
VPS11-205ENST00000534551 CHRFAM7AQ494W8 412 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 ACSM3Q53FZ2 586 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 BTN2A1Q7KYR7 527 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 SLC36A1Q7Z2H8 476 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 TNFAIP8L1Q8WVP5 186 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 H1FXQ92522 213 aaKnown RBP11.61□□□□□ -0.55
VPS11-205ENST00000534551 GPER1Q99527 375 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 MGLLQ99685 303 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 NUDT16L1Q9BRJ7 211 aaKnown RBP11.61□□□□□ -0.55
VPS11-205ENST00000534551 TMEM160Q9NX00 188 aa11.61□□□□□ -0.55
VPS11-205ENST00000534551 SLC25A10Q9UBX3 287 aaPredicted RBP11.61□□□□□ -0.55
VPS11-205ENST00000534551 POLR3KQ9Y2Y1 108 aaPredicted RBP11.61□□□□□ -0.55
VPS11-205ENST00000534551 SF3B6Q9Y3B4 125 aaKnown RBP11.61□□□□□ -0.55
VPS11-205ENST00000534551 MXRA5Q9NR99 2828 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 IGHV3OR16-10A0A075B7F0 116 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 MEX3AA1L020 520 aaKnown RBP11.6□□□□□ -0.55
VPS11-205ENST00000534551 NDUFA2O43678 99 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 KDM4BO94953 1096 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 ALX3O95076 343 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 CDRT1O95170 752 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 KNG1P01042 644 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 ACAA1P09110 424 aaPredicted RBP11.6□□□□□ -0.55
VPS11-205ENST00000534551 TMEM225BP0DP42 221 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 IL13RA1P78552 427 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 COL10A1Q03692 680 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 TPBGQ13641 420 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 PDCD1Q15116 288 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 ATPAF1Q5TC12 328 aaPredicted RBP11.6□□□□□ -0.55
VPS11-205ENST00000534551 ZNF773Q6PK81 442 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 METAP1DQ6UB28 335 aaPredicted RBP11.6□□□□□ -0.55
VPS11-205ENST00000534551 TMEM91Q6ZNR0 172 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 PHC2Q8IXK0 858 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 MKXQ8IYA7 352 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 BEX2Q9BXY8 128 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 C7orf69Q9H7B7 122 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 TMEM138Q9NPI0 162 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 RASL12Q9NYN1 266 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 ZNF581Q9P0T4 197 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 CDC42EP3Q9UKI2 254 aa11.6□□□□□ -0.55
VPS11-205ENST00000534551 A0A1W2PP11 408 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 NDUFB3O43676 98 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 SC5DO75845 299 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 HAND1O96004 215 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 NDUFB7P17568 137 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 PSMB9P28065 219 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 PRDX2P32119 198 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 ZNF93P35789 620 aaPredicted RBP11.59□□□□□ -0.55
VPS11-205ENST00000534551 SRP14P37108 136 aaKnown RBP11.59□□□□□ -0.55
VPS11-205ENST00000534551 TGFBR2P37173 567 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 NPY4RP50391 375 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 CAPZA1P52907 286 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 FABP5Q01469 135 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 KCTD21Q4G0X4 260 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 LRRC10Q5BKY1 277 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 ARMCX4Q5H9R4 360 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 CEACAM19Q7Z692 300 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 PRIMA1Q86XR5 153 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 FAM58AQ8N1B3 248 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 SVOPQ8N4V2 548 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 ASCC1Q8N9N2 400 aaKnown RBP11.59□□□□□ -0.55
VPS11-205ENST00000534551 RAB40AQ8WXH6 277 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 MUL1Q969V5 352 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 SDSLQ96GA7 329 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 POM121Q96HA1 1249 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 CYYR1Q96J86 154 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 CHST6Q9GZX3 395 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 RPUSD1Q9UJJ7 312 aaKnown RBP11.59□□□□□ -0.55
VPS11-205ENST00000534551 GSTK1Q9Y2Q3 226 aa11.59□□□□□ -0.55
VPS11-205ENST00000534551 TRAV40A0A0B4J280 105 aa11.58□□□□□ -0.56
VPS11-205ENST00000534551 PPIAL4CA0A0B4J2A2 164 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms