RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 TMEM14AQ9Y6G1 99 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 ARID1BQ8NFD5 2236 aaPredicted RBP16.82■□□□□ 0.28
SMPD1-210ENST00000534405 MMP7P09237 267 aaPredicted RBP16.82■□□□□ 0.28
SMPD1-210ENST00000534405 IRF2P14316 349 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 IGFBP3P17936 291 aaPredicted RBP16.82■□□□□ 0.28
SMPD1-210ENST00000534405 FUT3P21217 361 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 PDLIM4P50479 330 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 TMEM156Q8N614 296 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 OR8G5Q8NG78 346 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 OR1L3Q8NH93 324 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 OR8B4Q96RC9 309 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 FER1L5A0AVI2 2057 aa16.82■□□□□ 0.28
SMPD1-210ENST00000534405 ALG1L2C9J202 215 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 RND3P61587 244 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 ZNF519Q8TB69 540 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 HLA-CQ95604 372 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 RTBDNQ9BSG5 229 aaPredicted RBP16.81■□□□□ 0.28
SMPD1-210ENST00000534405 WFDC1Q9HC57 220 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 CKLFQ9UBR5 152 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 SDK1Q7Z5N4 2213 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 A0A1B0GV50 99 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 PRSS37A4D1T9 235 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 XKRYO14609 159 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 FSTP19883 344 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 FPR2P25090 351 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 OR1D5P58170 312 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 CFHR1Q03591 330 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 PLCXD2Q0VAA5 305 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 SLC17A1Q14916 467 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 NSDHLQ15738 373 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 PCK2Q16822 640 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 FAM213BQ8TBF2 198 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 WWTR1Q9GZV5 400 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 CHRNA10Q9GZZ6 450 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 PCED1AQ9H1Q7 454 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 POLR3KQ9Y2Y1 108 aaPredicted RBP16.81■□□□□ 0.28
SMPD1-210ENST00000534405 ABCA7Q8IZY2 2146 aa16.81■□□□□ 0.28
SMPD1-210ENST00000534405 SLC16A7O60669 478 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 CTLA4P16410 223 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 CD27P26842 260 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 CCKARP32238 428 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 MFGE8Q08431 387 aaPredicted RBP16.8■□□□□ 0.28
SMPD1-210ENST00000534405 FOXF1Q12946 379 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 RIPPLY2Q5TAB7 128 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 ZNF248Q8NDW4 579 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 OR1N1Q8NGS0 311 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 TBL1XR1Q9BZK7 514 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 SH3BGRL3Q9H299 93 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 GPR173Q9NS66 373 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 TAS2R4Q9NYW5 299 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 TUBD1Q9UJT1 453 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 ZFP30Q9Y2G7 519 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 UNC13CQ8NB66 2214 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 FREM3P0C091 2139 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 CPAMD8Q8IZJ3 1885 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 SPAG17Q6Q759 2223 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 IGLV1-36A0A0B4J1U3 117 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 CLDN34H7C241 214 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 NPIPB7O75200 414 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 HSPB1P04792 205 aaKnown RBP16.8■□□□□ 0.28
SMPD1-210ENST00000534405 SELEP16581 610 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 CLDN6P56747 220 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 RPL27P61353 136 aaKnown RBP16.8■□□□□ 0.28
SMPD1-210ENST00000534405 CCL20P78556 96 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 SGCBQ16585 318 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 VAX1Q5SQQ9 334 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 CMBLQ96DG6 245 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 SCGB3A2Q96PL1 93 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 SRPK3Q9UPE1 567 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 DHDHQ9UQ10 334 aa16.8■□□□□ 0.28
SMPD1-210ENST00000534405 METTL12A8MUP2 240 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 GP1BBP13224 206 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 POLR2HP52434 150 aaKnown RBP16.79■□□□□ 0.28
SMPD1-210ENST00000534405 HLA-DRB3P79483 266 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 COL10A1Q03692 680 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 IAH1Q2TAA2 248 aaPredicted RBP16.79■□□□□ 0.28
SMPD1-210ENST00000534405 C1orf100Q5SVJ3 147 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 C1orf189Q5VU69 101 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 HLA-DQA1Q5Y7H0 255 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 Q7L0L9 218 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 FAM185AQ8N0U4 392 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 CYB561D1Q8N8Q1 229 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 TMEM18Q96B42 140 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 DNAJC4Q9NNZ3 241 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 KIAA1456Q9P272 454 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 CHTOPQ9Y3Y2 248 aaKnown RBP16.79■□□□□ 0.28
SMPD1-210ENST00000534405 TMED7-TICAM2A0A0A6YYA0 188 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 A0A1W2PQD3 144 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 MED19A0JLT2 244 aaPredicted RBP16.79■□□□□ 0.28
SMPD1-210ENST00000534405 XKRY2A2RUG3 117 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 FIGNL2A6NMB9 653 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 PPP5D1E7EU14 171 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 PGCP20142 388 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 SPSB3Q6PJ21 355 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 ZNF705AQ6ZN79 300 aaPredicted RBP16.79■□□□□ 0.28
SMPD1-210ENST00000534405 CHST4Q8NCG5 386 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 NKD1Q969G9 470 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 FAM46BQ96A09 425 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 C8orf44Q96CB5 159 aa16.79■□□□□ 0.28
SMPD1-210ENST00000534405 ANGPTL4Q9BY76 406 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms