RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 OR8J2Q8NGG1 315 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 OR52N4Q8NGI2 321 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 OR52H1Q8NGJ2 320 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 PFN4Q8NHR9 129 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 BBS10Q8TAM1 723 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 LRRC29Q8WV35 223 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 DNAJA4Q8WW22 397 aaPredicted RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 SPRYD4Q8WW59 207 aaPredicted RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 HIST1H2ACQ93077 130 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 RNFT2Q96EX2 444 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 GAFA1Q96PS6 74 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 OR52E6Q96RD3 313 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 PANX1Q96RD7 426 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 EPYCQ99645 322 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM110AQ9BQ89 295 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 TM2D3Q9BRN9 247 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 MCRIP2Q9BUT9 160 aaKnown RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 HCAR1Q9BXC0 346 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 C20orf27Q9GZN8 174 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 CCDC90BQ9GZT6 254 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 RBM38Q9H0Z9 239 aaKnown RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 METTL8Q9H825 291 aaKnown RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 RMND5AQ9H871 391 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 SP140LQ9H930 580 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 C12orf10Q9HB07 376 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 TMEM27Q9HBJ8 222 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 MEPEQ9NQ76 525 aaPredicted RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 POLE4Q9NR33 117 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 INIPQ9NRY2 104 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 C19orf12Q9NSK7 152 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 CHCHD3Q9NX63 227 aaKnown RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 VNN3Q9NY84 501 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 PTTG2Q9NZH5 202 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 KAAG1Q9UBP8 84 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 AASSQ9UDR5 926 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 RSL24D1Q9UHA3 163 aaKnown RBP2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 DCDC2Q9UHG0 476 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 BTNL2Q9UIR0 455 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 KCNG2Q9UJ96 466 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 HSF4Q9ULV5 492 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 DHDHQ9UQ10 334 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 POMPQ9Y244 141 aa2.31□□□□□ -2.04
CHMP4A-208ENST00000534106 A0A1W2PRG6 482 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 OR6C6A6NF89 314 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM90A7PA6NKC0 464 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 CD300LBA8K4G0 201 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 C12orf71A8MTZ7 269 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM90A22PA8MWA6 464 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM90A12PA8MX19 464 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM90A23PA8MXZ1 464 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 F5H5K5 113 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 M0R1W7 72 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 CCL24O00175 119 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 GNGT2O14610 69 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 CDIPTO14735 213 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 UBDO15205 165 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 NDUFA2O43678 99 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 SNNO75324 88 aaPredicted RBP2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 ATP6V1G1O75348 118 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 GMNNO75496 209 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 OR7A10O76100 309 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 BRI3O95415 125 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 KRT75O95678 551 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 MT-ATP6P00846 226 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 ARG1P05089 322 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 CTLA4P16410 223 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 MSR1P21757 451 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 AQP1P29972 269 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 PRDX6P30041 224 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 RPL5P46777 297 aaKnown RBP2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 GABRA2P47869 451 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 GSK3BP49841 420 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 RPL14P50914 215 aaKnown RBP2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 PSMD7P51665 324 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC7A2P52569 658 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 CRISP3P54108 245 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 P2RX3P56373 397 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 DSTNP60981 165 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 PCBD1P61457 104 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 RPL36AP83881 106 aaKnown RBP2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 KCNJ8Q15842 424 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 HAGHQ16775 308 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 MEP1BQ16820 701 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 ENTPD8Q5MY95 495 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 C9orf66Q5T8R8 295 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 OGFRL1Q5TC84 451 aaPredicted RBP2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 NCR3LG1Q68D85 454 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 ZFP1Q6P2D0 407 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 C5orf46Q6UWT4 87 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 RNF165Q6ZSG1 346 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 FOXL2NBQ6ZUU3 175 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 NANOGNBQ7Z5D8 188 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 ADCK1Q86TW2 530 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 HAPLN4Q86UW8 402 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 DHFR2Q86XF0 187 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 NKAIN4Q8IVV8 208 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 MICU2Q8IYU8 434 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 PGAM4Q8N0Y7 254 aa2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 DRAXINQ8NBI3 349 aaPredicted RBP2.3□□□□□ -2.04
CHMP4A-208ENST00000534106 C11orf65Q8NCR3 313 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms