RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 DEFA1P59665 94 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 DEFA3P59666 94 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 BLOC1S1P78537 153 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 ASAH1Q13510 395 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 SNTB1Q13884 538 aaKnown RBP4.9□□□□□ -1.63
CHKA-208ENST00000533910 IL18Q14116 193 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 ZMYND11Q15326 602 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 OR8B8Q15620 311 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 SNAI3Q3KNW1 292 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 PYDC2Q56P42 97 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 HACD4Q5VWC8 232 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 RTL6Q6ICC9 239 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 PYHIN1Q6K0P9 492 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 TMEM53Q6P2H8 277 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 UTS2BQ765I0 119 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 LUZP2Q86TE4 346 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 NAA40Q86UY6 237 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 COMMD2Q86X83 199 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 ZNF584Q8IVC4 421 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 UBE2J2Q8N2K1 259 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 Q8N402 240 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 OR4M2Q8NGB6 313 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 OR5D14Q8NGL3 314 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 OR5M9Q8NGP3 310 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 GLMPQ8WWB7 406 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 PP6455Q8WZ26 134 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 PTX4Q96A99 478 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 FGGYQ96C11 551 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 HAVCR1Q96D42 359 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 ZNF75AQ96N20 296 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 SSX3Q99909 188 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 C1QTNF5Q9BXJ0 243 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 CHST5Q9GZS9 411 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 CTDSP1Q9GZU7 261 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 PLEKHA1Q9HB21 404 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 SCPEP1Q9HB40 452 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 SPACA1Q9HBV2 294 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 RHBDL2Q9NX52 303 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 GAB2Q9UQC2 676 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 MRPS7Q9Y2R9 242 aaKnown RBP4.9□□□□□ -1.63
CHKA-208ENST00000533910 MAB21L2Q9Y586 359 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 DMRT1Q9Y5R6 373 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 SVILO95425 2214 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 RTTNQ86VV8 2226 aa4.9□□□□□ -1.63
CHKA-208ENST00000533910 ATMQ13315 3056 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 BOD1L1Q8NFC6 3051 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 LOC100509620A0A075B734 347 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 IGKV1-9A0A0C4DH69 117 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 TMEM272A0A1B0GTI8 110 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 CIB4A0PJX0 185 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 OOEPA6NGQ2 149 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 ZNHIT1O43257 154 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 XRCC2O43543 280 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 GSTZ1O43708 216 aaPredicted RBP4.89□□□□□ -1.63
CHKA-208ENST00000533910 CGAP01215 116 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 HOXD4P09016 255 aaPredicted RBP4.89□□□□□ -1.63
CHKA-208ENST00000533910 OCMP0CE72 109 aaPredicted RBP4.89□□□□□ -1.63
CHKA-208ENST00000533910 ABOP16442 354 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 ACKR3P25106 362 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 HTR2CP28335 458 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 TIMP3P35625 211 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 PLA2G5P39877 138 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 HTR2BP41595 481 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 RANBP1P43487 201 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 PTH2RP49190 550 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 POU3F4P49335 361 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 ART1P52961 327 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 QRFPP83859 136 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 PITPNAQ00169 270 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 TGFBR3Q03167 851 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 SPOCK1Q08629 439 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 PLA2G7Q13093 441 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 TNK1Q13470 666 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 TRIM16LQ309B1 348 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 LINC00303Q3SY05 128 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 HIKESHIQ53FT3 197 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 RNASE12Q5GAN4 147 aaKnown RBP4.89□□□□□ -1.63
CHKA-208ENST00000533910 GLYATL3Q5SZD4 288 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 C9orf135Q5VTT2 229 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 TMEM42Q69YG0 159 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 MYO7BQ6PIF6 2116 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 CRIP3Q6Q6R5 217 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 RBPMS2Q6ZRY4 209 aaKnown RBP4.89□□□□□ -1.63
CHKA-208ENST00000533910 DNM1P46Q6ZS02 220 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 CCDC36Q8IYA8 594 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 GCNT2Q8N0V5 402 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 GABRG1Q8N1C3 465 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 C17orf78Q8N4C9 275 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 OR51D1Q8NGF3 324 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 OR52N4Q8NGI2 321 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 OR4D6Q8NGJ1 314 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 OR13C9Q8NGT0 318 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 SYNPRQ8TBG9 265 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 FAM57AQ8TBR7 257 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 SMIM4Q8WVI0 70 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 AKAP1Q92667 903 aaKnown RBP eCLIP4.89□□□□□ -1.63
CHKA-208ENST00000533910 SLAMF9Q96A28 289 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 RFT1Q96AA3 541 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 FAM3DQ96BQ1 224 aa4.89□□□□□ -1.63
CHKA-208ENST00000533910 STARD4Q96DR4 205 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms