RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 TAAR6Q96RI8 345 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 SGIP1Q9BQI5 828 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 WDR13Q9H1Z4 485 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 RCL1Q9Y2P8 373 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 NAV1Q8NEY1 1877 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 LINC01553A4QN01 128 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 POM121BA6NF01 834 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 FAM171A2A8MVW0 826 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 K7N7A8 449 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 SPINT2O43291 252 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 LYPD3O95274 346 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 CD27P26842 260 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 ERVFC1-1P60608 527 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 ETFRF1Q6IPR1 90 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 FAAP20Q6NZ36 180 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 THNSL2Q86YJ6 484 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 OR1N1Q8NGS0 311 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 SMIM12Q96EX1 92 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 DUSP23Q9BVJ7 150 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 C1QTNF6Q9BXI9 259 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 PRRG4Q9BZD6 226 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 FBXO4Q9UKT5 387 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 MMP17Q9ULZ9 603 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 CDC14CA4D256 554 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 ALOX12BO75342 701 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 EFEMP2O95967 443 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 P04436 131 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 CTHP32929 405 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 ARR3P36575 388 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 ID3Q02535 119 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 HABP2Q14520 560 aaPredicted RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 WDR31Q8NA23 367 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 OR5C1Q8NGR4 320 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 BARX1Q9HBU1 254 aaPredicted RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 DTX4Q9Y2E6 619 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 A0A1W2PPH5 198 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 NPIPB7O75200 414 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 KLF8O95600 359 aaPredicted RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 ACTL6AO96019 429 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 PPYP01298 95 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 SRP19P09132 144 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 WNT2P09544 360 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 FXYD4P59646 89 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 RPS20P60866 119 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 SLC38A11Q08AI6 406 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 FZD5Q13467 585 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 ELOBQ15370 118 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 TMEM164Q5U3C3 297 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 PIP4P2Q8N4L2 257 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 GATSQ8NAP1 163 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 IFI44Q8TCB0 444 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 COL25A1Q9BXS0 654 aaPredicted RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 PECRQ9BY49 303 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 ESRP2Q9H6T0 727 aaKnown RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 FGF21Q9NSA1 209 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 BOKQ9UMX3 212 aaPredicted RBP3.58□□□□□ -1.84
SOX6-217ENST00000533870 NRAPQ86VF7 1730 aa3.58□□□□□ -1.84
SOX6-217ENST00000533870 AFDNP55196 1824 aaKnown RBP3.57□□□□□ -1.84
SOX6-217ENST00000533870 DDX60LQ5H9U9 1706 aaKnown RBP3.57□□□□□ -1.84
SOX6-217ENST00000533870 TRAV14DV4A0A0A6YYC5 116 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 C3orf85A0A1B0GTC6 90 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 CLEC18AA5D8T8 446 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 J3QT63 122 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 CRISP2P16562 243 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 NDUFB7P17568 137 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 BTF3P20290 206 aaKnown RBP3.57□□□□□ -1.84
SOX6-217ENST00000533870 KIR2DS2P43631 304 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 BPIFB3P59826 476 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 RHOBP62745 196 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 PLPPR5Q32ZL2 321 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 CLEC18CQ8NCF0 446 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 NAXEQ8NCW5 288 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 OR4N2Q8NGD1 307 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 OR10G8Q8NGN5 311 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 CMTM2Q8TAZ6 248 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 FAM3CQ92520 227 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 KCNK17Q96T54 332 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 PKIBQ9C010 78 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 PIAS3Q9Y6X2 628 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 A0A1W2PNV4 684 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 LIPT2A6NK58 231 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 K7EQM0 130 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 ETV2O00321 342 aaPredicted RBP3.57□□□□□ -1.84
SOX6-217ENST00000533870 RBFOX2O43251 390 aaKnown RBP eCLIP3.57□□□□□ -1.84
SOX6-217ENST00000533870 FAM157CP0CG43 387 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 STAG3L2P0CL84 134 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 LIPCP11150 499 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 SLC37A1P57057 533 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 KLF3P57682 345 aaPredicted RBP3.57□□□□□ -1.84
SOX6-217ENST00000533870 FOXK1P85037 733 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 TMEM249Q2WGJ8 235 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 OR8G2PQ6IF36 304 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 ZNF705AQ6ZN79 300 aaPredicted RBP3.57□□□□□ -1.84
SOX6-217ENST00000533870 TMEM68Q96MH6 324 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 PMCHL2Q9BQD1 86 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 PYGO2Q9BRQ0 406 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 RBM24Q9BX46 236 aaKnown RBP3.57□□□□□ -1.84
SOX6-217ENST00000533870 TMEM231Q9H6L2 316 aa3.57□□□□□ -1.84
SOX6-217ENST00000533870 LHX9Q9NQ69 397 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms