RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 TGFBR2P37173 567 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 NANOS3P60323 173 aaKnown RBP13.78□□□□□ -0.2
PKP3-209ENST00000533069 UBA52P62987 128 aaKnown RBP13.78□□□□□ -0.2
PKP3-209ENST00000533069 LRRC10Q5BKY1 277 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 ZNF573Q86YE8 665 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 BCL6BQ8N143 479 aaPredicted RBP13.78□□□□□ -0.2
PKP3-209ENST00000533069 OR14K1Q8NGZ2 314 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 AQP3Q92482 292 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 RNF166Q96A37 237 aaPredicted RBP13.78□□□□□ -0.2
PKP3-209ENST00000533069 TMIGD2Q96BF3 282 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 C10orf35Q96D05 121 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 DGCR14Q96DF8 476 aaKnown RBP13.78□□□□□ -0.2
PKP3-209ENST00000533069 SEH1LQ96EE3 360 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 MED30Q96HR3 178 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 WDFY2Q96P53 400 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 PCGF1Q9BSM1 259 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 PLEKHA1Q9HB21 404 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 NLKQ9UBE8 527 aa13.78□□□□□ -0.2
PKP3-209ENST00000533069 SF3B6Q9Y3B4 125 aaKnown RBP13.78□□□□□ -0.2
PKP3-209ENST00000533069 IGHV3OR16-10A0A075B7F0 116 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 A0A1B0GVI7 797 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 DPPA5A6NC42 116 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 A6NHS1 94 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 AIREO43918 545 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 FCN3O75636 299 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 RHBDL1O75783 438 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 ARL6IP5O75915 188 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 MMP9P14780 707 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 GMFBP60983 142 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 IL13RA1P78552 427 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 BAMBIQ13145 260 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 PDCD1Q15116 288 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 Q499Y3 187 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 GPR107Q5VW38 600 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 HAGHLQ6PII5 290 aaPredicted RBP13.77□□□□□ -0.21
PKP3-209ENST00000533069 ZNF788Q6ZQV5 615 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 CLVS1Q8IUQ0 354 aaPredicted RBP13.77□□□□□ -0.21
PKP3-209ENST00000533069 PRSS35Q8N3Z0 413 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 ANGPTL6Q8NI99 470 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 SNTG1Q9NSN8 517 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 RASL12Q9NYN1 266 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 POLDIP2Q9Y2S7 368 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 KPTNQ9Y664 436 aa13.77□□□□□ -0.21
PKP3-209ENST00000533069 SIRT4Q9Y6E7 314 aaPredicted RBP13.77□□□□□ -0.21
PKP3-209ENST00000533069 A0A1B0GW55 424 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 PQLC2LA1A4F0 135 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 ANKRD61A6NGH8 418 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 DNAJC9-AS1A6NH13 148 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 OR2AT4A6NND4 320 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 CLDN34H7C241 214 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 J3QT63 122 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 SLC22A1O15245 554 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 SIGLEC5O15389 551 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 SYT7O43581 403 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 SC5DO75845 299 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 DUX4L2P0CJ85 424 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 DUX4L3P0CJ86 424 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 DUX4L4P0CJ87 422 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 DUX4L5P0CJ88 424 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 DUX4L6P0CJ89 424 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 DUX4L7P0CJ90 424 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 AMY2BP19961 511 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 PRTN3P24158 256 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 KIR3DL2P43630 455 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 COMPP49747 757 aaPredicted RBP13.76□□□□□ -0.21
PKP3-209ENST00000533069 IKZF1Q13422 519 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 DUX4L9Q6RFH8 374 aaPredicted RBP13.76□□□□□ -0.21
PKP3-209ENST00000533069 C12orf54Q6X4T0 127 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 KIR3DL3Q8N743 410 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 ZFP41Q8N8Y5 198 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 POC1AQ8NBT0 407 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 LY6G5BQ8NDX9 201 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 OR5T2Q8NGG2 359 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 GCDHQ92947 438 aaPredicted RBP13.76□□□□□ -0.21
PKP3-209ENST00000533069 ZNF48Q96MX3 618 aaPredicted RBP13.76□□□□□ -0.21
PKP3-209ENST00000533069 GAFA1Q96PS6 74 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 TBX15Q96SF7 602 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 PDCD1LG2Q9BQ51 273 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 TMED9Q9BVK6 235 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 SIRPDQ9H106 197 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 CNTD2Q9H8S5 307 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 GPR173Q9NS66 373 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 DUX4Q9UBX2 424 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 RSL24D1Q9UHA3 163 aaKnown RBP13.76□□□□□ -0.21
PKP3-209ENST00000533069 WNK2Q9Y3S1 2297 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 ARHGAP32A7KAX9 2087 aa13.76□□□□□ -0.21
PKP3-209ENST00000533069 TRBV5-5A0A0J9YX44 114 aa13.75□□□□□ -0.21
PKP3-209ENST00000533069 PNMA8CA0A1B0GUJ8 204 aa13.75□□□□□ -0.21
PKP3-209ENST00000533069 TMEM89A2RUT3 159 aa13.75□□□□□ -0.21
PKP3-209ENST00000533069 CCDC160A6NGH7 325 aa13.75□□□□□ -0.21
PKP3-209ENST00000533069 SFTPBP07988 381 aa13.75□□□□□ -0.21
PKP3-209ENST00000533069 ACAA1P09110 424 aaPredicted RBP13.75□□□□□ -0.21
PKP3-209ENST00000533069 HAAOP46952 286 aa13.75□□□□□ -0.21
PKP3-209ENST00000533069 DOC2BQ14184 412 aa13.75□□□□□ -0.21
PKP3-209ENST00000533069 SMIM21Q3B7S5 101 aa13.75□□□□□ -0.21
PKP3-209ENST00000533069 CMTM4Q8IZR5 234 aa13.75□□□□□ -0.21
PKP3-209ENST00000533069 DCTN5Q9BTE1 182 aa13.75□□□□□ -0.21
PKP3-209ENST00000533069 RBM38Q9H0Z9 239 aaKnown RBP13.75□□□□□ -0.21
PKP3-209ENST00000533069 SLC25A10Q9UBX3 287 aaPredicted RBP13.75□□□□□ -0.21
PKP3-209ENST00000533069 SLC7A11Q9UPY5 501 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms