RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CAB39Q9Y376 341 aaPredicted RBP12.66□□□□□ -0.38
CPSF1-210ENST00000532935 TRBV2A0A0J9YWF9 115 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 DNAJC9-AS1A6NH13 148 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 F8VVB4 439 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 F8VWA3 439 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 SLC1A7O00341 560 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 INMTO95050 263 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 KNG1P01042 644 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 MYL12AP19105 171 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 CAPZA1P52907 286 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 MTCP1P56278 107 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 BAMBIQ13145 260 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 RBM48Q5RL73 367 aaKnown RBP12.65□□□□□ -0.38
CPSF1-210ENST00000532935 OR2G6Q5TZ20 316 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 LHFPL2Q6ZUX7 228 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 CMTM4Q8IZR5 234 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 OR13C9Q8NGT0 318 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 FBLIM1Q8WUP2 373 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 GGHQ92820 318 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 TMEM80Q96HE8 168 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 OPALINQ96PE5 141 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 ZCCHC4Q9H5U6 513 aa12.65□□□□□ -0.38
CPSF1-210ENST00000532935 EXOSC1Q9Y3B2 195 aaKnown RBP12.65□□□□□ -0.38
CPSF1-210ENST00000532935 TRBV23-1A0A0A0MS06 115 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 IGHV1-69DA0A0B4J2H0 117 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 MDFIC2A0A1B0GVS7 189 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 A0A1W2PQ09 198 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 IGHV1-69P01742 117 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 MT-ND2P03891 347 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 OCM2P0CE71 109 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 OCMP0CE72 109 aaPredicted RBP12.64□□□□□ -0.39
CPSF1-210ENST00000532935 POU3F4P49335 361 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 DEFB112Q30KQ8 113 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 CCDC58Q4VC31 144 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 XAF1Q6GPH4 301 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 LAIR2Q6ISS4 152 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 RPL22L1Q6P5R6 122 aaKnown RBP12.64□□□□□ -0.39
CPSF1-210ENST00000532935 MKXQ8IYA7 352 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 Q8N7P7 452 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 TSEN15Q8WW01 171 aaKnown RBP12.64□□□□□ -0.39
CPSF1-210ENST00000532935 GATAD2BQ8WXI9 593 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 C1orf147Q96MC9 270 aaPredicted RBP12.64□□□□□ -0.39
CPSF1-210ENST00000532935 DUX5Q96PT3 197 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 MRPS26Q9BYN8 205 aaKnown RBP12.64□□□□□ -0.39
CPSF1-210ENST00000532935 CLEC2DQ9UHP7 191 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 BLOC1S6Q9UL45 172 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 DHDHQ9UQ10 334 aa12.64□□□□□ -0.39
CPSF1-210ENST00000532935 EFCAB10A6NFE3 127 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 CYB5AP00167 134 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 PIPP12273 146 aaPredicted RBP12.63□□□□□ -0.39
CPSF1-210ENST00000532935 PRTN3P24158 256 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 NPBWR2P48146 333 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 ACTG1P63261 375 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 ST3GAL4Q11206 333 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 PDZK1IP1Q13113 114 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 CDK5R1Q15078 307 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 SERPINA12Q8IW75 414 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 PDZD9Q8IXQ8 264 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 Q8IYB0 196 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 PARP16Q8N5Y8 322 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 OR5D14Q8NGL3 314 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 RPS4Y2Q8TD47 263 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 RGP1Q92546 391 aaPredicted RBP12.63□□□□□ -0.39
CPSF1-210ENST00000532935 EMG1Q92979 244 aaKnown RBP12.63□□□□□ -0.39
CPSF1-210ENST00000532935 RFT1Q96AA3 541 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 SPACA5Q96QH8 159 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 PRDM13Q9H4Q3 707 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 ZMAT3Q9HA38 289 aaKnown RBP12.63□□□□□ -0.39
CPSF1-210ENST00000532935 NEK6Q9HC98 313 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 SIRT7Q9NRC8 400 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 CHCHD3Q9NX63 227 aaKnown RBP12.63□□□□□ -0.39
CPSF1-210ENST00000532935 BABAM2Q9NXR7 383 aa12.63□□□□□ -0.39
CPSF1-210ENST00000532935 CNOT2Q9NZN8 540 aaKnown RBP12.63□□□□□ -0.39
CPSF1-210ENST00000532935 A0A087WXM4 84 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 TRIM64CA6NLI5 447 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 M0R1W7 72 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 SPRY1O43609 319 aaPredicted RBP12.62□□□□□ -0.39
CPSF1-210ENST00000532935 XPNPEP2O43895 674 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 MRPS14O60783 128 aaKnown RBP12.62□□□□□ -0.39
CPSF1-210ENST00000532935 ALX3O95076 343 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 TK1P04183 234 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 CHRM2P08172 466 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 BCL3P20749 454 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 DLX1P56177 255 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 RPL31P62899 125 aaKnown RBP12.62□□□□□ -0.39
CPSF1-210ENST00000532935 COL10A1Q03692 680 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 SLC9A3R2Q15599 337 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 C6orf141Q5SZD1 244 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 METAP1DQ6UB28 335 aaPredicted RBP12.62□□□□□ -0.39
CPSF1-210ENST00000532935 C1orf122Q6ZSJ8 110 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 RNF144BQ7Z419 303 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 FAM185AQ8N0U4 392 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 OR52N1Q8NH53 320 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 ZDHHC16Q969W1 377 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 FAM234AQ9H0X4 552 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 C19orf12Q9NSK7 152 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 PLCXD1Q9NUJ7 323 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 RBFOX1Q9NWB1 397 aaKnown RBP12.62□□□□□ -0.39
CPSF1-210ENST00000532935 NDUFA13Q9P0J0 144 aa12.62□□□□□ -0.39
CPSF1-210ENST00000532935 IL36RNQ9UBH0 155 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms