RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 PDZD9Q8IXQ8 264 aa14.35□□□□□ -0.11
CTSB-223ENST00000532370 ZFP41Q8N8Y5 198 aa14.35□□□□□ -0.11
CTSB-223ENST00000532370 RPS4Y2Q8TD47 263 aa14.35□□□□□ -0.11
CTSB-223ENST00000532370 TSEN15Q8WW01 171 aaKnown RBP14.35□□□□□ -0.11
CTSB-223ENST00000532370 SPSB1Q96BD6 273 aa14.35□□□□□ -0.11
CTSB-223ENST00000532370 VCX3BQ9H321 246 aa14.35□□□□□ -0.11
CTSB-223ENST00000532370 PLCXD1Q9NUJ7 323 aa14.35□□□□□ -0.11
CTSB-223ENST00000532370 RBFOX1Q9NWB1 397 aaKnown RBP14.35□□□□□ -0.11
CTSB-223ENST00000532370 CHCHD3Q9NX63 227 aaKnown RBP14.35□□□□□ -0.11
CTSB-223ENST00000532370 CNOT2Q9NZN8 540 aaKnown RBP14.35□□□□□ -0.11
CTSB-223ENST00000532370 IL36RNQ9UBH0 155 aa14.35□□□□□ -0.11
CTSB-223ENST00000532370 CENPVL3A0A0U1RRI6 287 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 MDFIC2A0A1B0GVS7 189 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 OGG1O15527 345 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 ANGPTL7O43827 346 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 MT-ND2P03891 347 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 OCM2P0CE71 109 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 OCMP0CE72 109 aaPredicted RBP14.34□□□□□ -0.11
CTSB-223ENST00000532370 BCL3P20749 454 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 PDZK1IP1Q13113 114 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 ASPHD2Q6ICH7 369 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 LHFPL2Q6ZUX7 228 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 SERPINA12Q8IW75 414 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 PARP16Q8N5Y8 322 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 ZDHHC22Q8N966 263 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 OR5D18Q8NGL1 313 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 OR13C5Q8NGS8 318 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 OR52N1Q8NH53 320 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 C8orf46Q8TAG6 207 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 HAVCR2Q8TDQ0 301 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 SGCDQ92629 289 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 LHX4Q969G2 390 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 DUX5Q96PT3 197 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 FKBP14Q9NWM8 211 aa14.34□□□□□ -0.11
CTSB-223ENST00000532370 IGKV1-12A0A0C4DH73 117 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 KNG1P01042 644 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 IGKV1D-12P01611 117 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 COL10A1Q03692 680 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 C6orf141Q5SZD1 244 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 GPR157Q5UAW9 335 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 C9orf139Q6ZV77 190 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 VMO1Q7Z5L0 202 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 STX19Q8N4C7 294 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 ZNF561Q8N587 486 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 Q8N7P7 452 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.33□□□□□ -0.12
CTSB-223ENST00000532370 OR4M1Q8NGD0 313 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 OR51A2Q8NGJ7 313 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 OR5D14Q8NGL3 314 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 SPATA3Q8NHX4 192 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 GHSRQ92847 366 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 SIRT7Q9NRC8 400 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 C19orf12Q9NSK7 152 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 KPTNQ9Y664 436 aa14.33□□□□□ -0.12
CTSB-223ENST00000532370 A0A1W2PQ09 198 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 PTGES3LE9PB15 166 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 SLC1A7O00341 560 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 SULT1B1O43704 296 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 RPSAP08865 295 aaKnown RBP14.32□□□□□ -0.12
CTSB-223ENST00000532370 DUSP1P28562 367 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 SNU13P55769 128 aaKnown RBP14.32□□□□□ -0.12
CTSB-223ENST00000532370 MED21Q13503 144 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 DMKNQ6E0U4 476 aaPredicted RBP14.32□□□□□ -0.12
CTSB-223ENST00000532370 MKXQ8IYA7 352 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 GPR148Q8TDV2 347 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 EMG1Q92979 244 aaKnown RBP14.32□□□□□ -0.12
CTSB-223ENST00000532370 ORAI1Q96D31 301 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 SMIM19Q96E16 107 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 C1orf147Q96MC9 270 aaPredicted RBP14.32□□□□□ -0.12
CTSB-223ENST00000532370 NKX3-1Q99801 234 aaPredicted RBP14.32□□□□□ -0.12
CTSB-223ENST00000532370 TAS2R4Q9NYW5 299 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 ZNF281Q9Y2X9 895 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 DOCK11Q5JSL3 2073 aa14.32□□□□□ -0.12
CTSB-223ENST00000532370 PNMA8CA0A1B0GUJ8 204 aa14.31□□□□□ -0.12
CTSB-223ENST00000532370 ALX3O95076 343 aa14.31□□□□□ -0.12
CTSB-223ENST00000532370 TK1P04183 234 aa14.31□□□□□ -0.12
CTSB-223ENST00000532370 HCKP08631 526 aa14.31□□□□□ -0.12
CTSB-223ENST00000532370 PDCD1Q15116 288 aa14.31□□□□□ -0.12
CTSB-223ENST00000532370 KISS1Q15726 138 aa14.31□□□□□ -0.12
CTSB-223ENST00000532370 DEFB112Q30KQ8 113 aa14.31□□□□□ -0.12
CTSB-223ENST00000532370 ZNF529Q6P280 563 aa14.31□□□□□ -0.12
CTSB-223ENST00000532370 RBMS3Q6XE24 437 aaKnown RBP14.31□□□□□ -0.12
CTSB-223ENST00000532370 FAM185AQ8N0U4 392 aa14.31□□□□□ -0.12
CTSB-223ENST00000532370 FAM58AQ8N1B3 248 aa14.31□□□□□ -0.12
CTSB-223ENST00000532370 PGLYRP3Q96LB9 341 aa14.31□□□□□ -0.12
CTSB-223ENST00000532370 PAK1IP1Q9NWT1 392 aaPredicted RBP14.31□□□□□ -0.12
CTSB-223ENST00000532370 IGHV1-69DA0A0B4J2H0 117 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 TMEM82A0PJX8 343 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 MEX3AA1L020 520 aaKnown RBP14.3□□□□□ -0.12
CTSB-223ENST00000532370 K7N7A8 449 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 ZNF737O75373 536 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 HAND1O96004 215 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 CYB5AP00167 134 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 IGHV1-69P01742 117 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 CHRM2P08172 466 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 PRKACAP17612 351 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 ZP1P60852 638 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 RPS11P62280 158 aaKnown RBP eCLIP14.3□□□□□ -0.12
CTSB-223ENST00000532370 RPL31P62899 125 aaKnown RBP14.3□□□□□ -0.12
CTSB-223ENST00000532370 UBA52P62987 128 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms