RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, human

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-222	ENST00000532285	COMP	P49747	757 aa	Predicted RBP	18.88	■□□□□ 0.61
CAPN1-222	ENST00000532285	GABPB1	Q06547	395 aa	Predicted RBP	18.88	■□□□□ 0.61
CAPN1-222	ENST00000532285	BLMH	Q13867	455 aa		18.88	■□□□□ 0.61
CAPN1-222	ENST00000532285	SLC9A3R2	Q15599	337 aa		18.88	■□□□□ 0.61
CAPN1-222	ENST00000532285	CCDC58	Q4VC31	144 aa		18.88	■□□□□ 0.61
CAPN1-222	ENST00000532285	C8orf59	Q8N0T1	100 aa	Predicted RBP	18.88	■□□□□ 0.61
CAPN1-222	ENST00000532285	OR5D14	Q8NGL3	314 aa		18.88	■□□□□ 0.61
CAPN1-222	ENST00000532285	OPALIN	Q96PE5	141 aa		18.88	■□□□□ 0.61
CAPN1-222	ENST00000532285	FAM234A	Q9H0X4	552 aa		18.88	■□□□□ 0.61
CAPN1-222	ENST00000532285	ZCCHC4	Q9H5U6	513 aa		18.88	■□□□□ 0.61
CAPN1-222	ENST00000532285	DIMT1	Q9UNQ2	313 aa	Known RBP	18.88	■□□□□ 0.61
CAPN1-222	ENST00000532285	EXOSC1	Q9Y3B2	195 aa	Known RBP	18.88	■□□□□ 0.61
CAPN1-222	ENST00000532285	TENM1	Q9UKZ4	2725 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285		F8VVB4	439 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285		F8VWA3	439 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	INMT	O95050	263 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	MYL12A	P19105	171 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	POU3F4	P49335	361 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	GUCA2A	Q02747	115 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	RPL22L1	Q6P5R6	122 aa	Known RBP	18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285		Q6YL49	198 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	SERPINA12	Q8IW75	414 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	PDZD9	Q8IXQ8	264 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	FAM185A	Q8N0U4	392 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	OR13C9	Q8NGT0	318 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	TBC1D15	Q8TC07	691 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	DSCAML1	Q8TD84	2053 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	METTL8	Q9H825	291 aa	Known RBP	18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	UNKL	Q9H9P5	680 aa	Known RBP	18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	SIRT7	Q9NRC8	400 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	DHDH	Q9UQ10	334 aa		18.87	■□□□□ 0.61
CAPN1-222	ENST00000532285	HOXA3	O43365	443 aa	Predicted RBP	18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	ALX3	O95076	343 aa		18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	TK1	P04183	234 aa		18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	CHRM2	P08172	466 aa		18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	GNAO1	P09471	354 aa		18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	GTF2A1	P52655	376 aa	Predicted RBP	18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	RPL31	P62899	125 aa	Known RBP	18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	PDZK1IP1	Q13113	114 aa		18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	MED21	Q13503	144 aa		18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	FIP1L1	Q6UN15	594 aa	Known RBP	18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	PARP16	Q8N5Y8	322 aa		18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	TSEN15	Q8WW01	171 aa	Known RBP	18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	EMG1	Q92979	244 aa	Known RBP	18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	TMEM80	Q96HE8	168 aa		18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	SEBOX	Q9HB31	216 aa	Predicted RBP	18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	C19orf12	Q9NSK7	152 aa		18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285	CHCHD3	Q9NX63	227 aa	Known RBP	18.86	■□□□□ 0.61
CAPN1-222	ENST00000532285		A0A1W2PPH5	198 aa		18.85	■□□□□ 0.61
CAPN1-222	ENST00000532285		K7N7A8	449 aa		18.85	■□□□□ 0.61
CAPN1-222	ENST00000532285	COL10A1	Q03692	680 aa		18.85	■□□□□ 0.61
CAPN1-222	ENST00000532285	OR2G6	Q5TZ20	316 aa		18.85	■□□□□ 0.61
CAPN1-222	ENST00000532285	NCR3LG1	Q68D85	454 aa		18.85	■□□□□ 0.61
CAPN1-222	ENST00000532285	GGH	Q92820	318 aa		18.85	■□□□□ 0.61
CAPN1-222	ENST00000532285	RNASEK-C17orf49	H0YIS7	233 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	SPRY1	O43609	319 aa	Predicted RBP	18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	HKR1	P10072	659 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	BCL3	P20749	454 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	EEF1B2	P24534	225 aa	Known RBP	18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	NPBWR2	P48146	333 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	SLC34A1	Q06495	639 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	CDK5R1	Q15078	307 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	FAM58A	Q8N1B3	248 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	PIP4P2	Q8N4L2	257 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	ASCC1	Q8N9N2	400 aa	Known RBP	18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	OR5D13	Q8NGL4	314 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	RPS4Y2	Q8TD47	263 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	TNFRSF14	Q92956	283 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	RFT1	Q96AA3	541 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	BABAM2	Q9NXR7	383 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	NKX1-2	Q9UD57	310 aa	Predicted RBP	18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285	ANK2	Q01484	3957 aa		18.84	■□□□□ 0.61
CAPN1-222	ENST00000532285		A0A0U1RQK1	487 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	EFCAB10	A6NFE3	127 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	SULT1B1	O43704	296 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	MELTF	P08582	738 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	PIP	P12273	146 aa	Predicted RBP	18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	UBE2E1	P51965	193 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	ST3GAL4	Q11206	333 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	TMEM200B	Q69YZ2	307 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	XAF1	Q6GPH4	301 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	C16orf87	Q6PH81	154 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	TMEM86B	Q8N661	226 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	OR4M1	Q8NGD0	313 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	OR52N1	Q8NH53	320 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	GPR148	Q8TDV2	347 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	SNX22	Q96L94	193 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	SPACA5	Q96QH8	159 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	RHOF	Q9HBH0	211 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	RBFOX1	Q9NWB1	397 aa	Known RBP	18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	CNOT2	Q9NZN8	540 aa	Known RBP	18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	CLEC2D	Q9UHP7	191 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	GLS2	Q9UI32	602 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	FAM96B	Q9Y3D0	163 aa		18.83	■□□□□ 0.6
CAPN1-222	ENST00000532285	OGG1	O15527	345 aa		18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	ZNF737	O75373	536 aa		18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	HCK	P08631	526 aa		18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	DLX1	P56177	255 aa		18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	PRB3	Q04118	309 aa	Predicted RBP	18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	FOXL1	Q12952	345 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms