RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 ZNF514Q96K75 400 aaPredicted RBP2□□□□□ -2.09
BRCA2-203ENST00000528762 DOK1Q99704 481 aa2□□□□□ -2.09
BRCA2-203ENST00000528762 RNF5Q99942 180 aa2□□□□□ -2.09
BRCA2-203ENST00000528762 CHCHD7Q9BUK0 85 aa2□□□□□ -2.09
BRCA2-203ENST00000528762 TBL1XR1Q9BZK7 514 aa2□□□□□ -2.09
BRCA2-203ENST00000528762 NDEL1Q9GZM8 345 aa2□□□□□ -2.09
BRCA2-203ENST00000528762 SRRQ9GZT4 340 aa2□□□□□ -2.09
BRCA2-203ENST00000528762 NXF2Q9GZY0 626 aaKnown RBP2□□□□□ -2.09
BRCA2-203ENST00000528762 WDR54Q9H977 334 aa2□□□□□ -2.09
BRCA2-203ENST00000528762 ABCB9Q9NP78 766 aa2□□□□□ -2.09
BRCA2-203ENST00000528762 PARP11Q9NR21 331 aa2□□□□□ -2.09
BRCA2-203ENST00000528762 IMP3Q9NV31 184 aaKnown RBP2□□□□□ -2.09
BRCA2-203ENST00000528762 ATP6V1DQ9Y5K8 247 aa2□□□□□ -2.09
BRCA2-203ENST00000528762 NUP205Q92621 2012 aa2□□□□□ -2.09
BRCA2-203ENST00000528762 KIAA0232Q92628 1395 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 BRWD3Q6RI45 1802 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 IGHV3-49A0A0A0MS15 119 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 GOLGA8IPA6NC78 632 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 KLRC4-KLRK1H3BQV0 150 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 RTL8CO15255 209 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 CRXO43186 299 aaPredicted RBP1.99□□□□□ -2.09
BRCA2-203ENST00000528762 CCNKO75909 580 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 MAS1P04201 325 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 OR4Q2P0C623 313 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 RD3LP0DJH9 198 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 MUC1P15941 1255 aaPredicted RBP1.99□□□□□ -2.09
BRCA2-203ENST00000528762 RPA3P35244 121 aaPredicted RBP1.99□□□□□ -2.09
BRCA2-203ENST00000528762 GRB2P62993 217 aaKnown RBP1.99□□□□□ -2.09
BRCA2-203ENST00000528762 BAXQ07812 192 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 DMC1Q14565 340 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 PMVKQ15126 192 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 TRAM1Q15629 374 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 CEACAM21Q3KPI0 293 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 OR10J3Q5JRS4 329 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 RBM48Q5RL73 367 aaKnown RBP1.99□□□□□ -2.09
BRCA2-203ENST00000528762 FAM222AQ5U5X8 452 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 HBMQ6B0K9 141 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 BBS7Q8IWZ6 715 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 FAM9CQ8IZT9 166 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 ORMDL3Q8N138 153 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 RNF10Q8N5U6 811 aaKnown RBP1.99□□□□□ -2.09
BRCA2-203ENST00000528762 CCNYL1Q8N7R7 359 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 OR4K17Q8NGC6 315 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 ZNF461Q8TAF7 563 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 RNASEH2CQ8TDP1 164 aaKnown RBP1.99□□□□□ -2.09
BRCA2-203ENST00000528762 BLNKQ8WV28 456 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 BIRC8Q96P09 236 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 SPIN2AQ99865 258 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 SPIN2BQ9BPZ2 258 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 MRPL20Q9BYC9 149 aaKnown RBP1.99□□□□□ -2.09
BRCA2-203ENST00000528762 UPF3BQ9BZI7 483 aaKnown RBP1.99□□□□□ -2.09
BRCA2-203ENST00000528762 METTL8Q9H825 291 aaKnown RBP1.99□□□□□ -2.09
BRCA2-203ENST00000528762 PARVGQ9HBI0 331 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 FBXO6Q9NRD1 293 aaPredicted RBP1.99□□□□□ -2.09
BRCA2-203ENST00000528762 CA10Q9NS85 328 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 PRO0461Q9UI25 63 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 CBY1Q9Y3M2 126 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 USH1CQ9Y6N9 552 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 TRIP11Q15643 1979 aa1.99□□□□□ -2.09
BRCA2-203ENST00000528762 ABCB11O95342 1321 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 YLPM1P49750 1951 aaKnown RBP1.98□□□□□ -2.09
BRCA2-203ENST00000528762 IGLV4-60A0A075B6I1 120 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 LOC102724200A0A096LPH7 203 aaPredicted RBP1.98□□□□□ -2.09
BRCA2-203ENST00000528762 OR2AT4A6NND4 320 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 A8MWL6 223 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 F8VZ95 297 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 J3QLI3 93 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 TNFAIP8O95379 198 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 RLN2P04090 185 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 TSPOP30536 169 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 GCLMP48507 274 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 TUFMP49411 452 aaKnown RBP1.98□□□□□ -2.09
BRCA2-203ENST00000528762 RPL14P50914 215 aaKnown RBP1.98□□□□□ -2.09
BRCA2-203ENST00000528762 TAS2R43P59537 309 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 RPL10AP62906 217 aaKnown RBP1.98□□□□□ -2.09
BRCA2-203ENST00000528762 PITPNAQ00169 270 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 PRKCDQ05655 676 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 CDC20Q12834 499 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 COTL1Q14019 142 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 FLOT2Q14254 428 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 TRIP13Q15645 432 aaPredicted RBP1.98□□□□□ -2.09
BRCA2-203ENST00000528762 TMEM249Q2WGJ8 235 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 ATP6AP1LQ52LC2 224 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 LUZP6Q538Z0 58 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 CLEC19AQ6UXS0 136 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 SHISA6Q6ZSJ9 500 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 SLC25A29Q8N8R3 303 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 ACBD4Q8NC06 268 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 MNS1Q8NEH6 495 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 DNAJB3Q8WWF6 145 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 C22orf15Q8WYQ4 148 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 CCL17Q92583 94 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 ZMYND19Q96E35 227 aaPredicted RBP1.98□□□□□ -2.09
BRCA2-203ENST00000528762 ARL5BQ96KC2 179 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 OR10C1Q96KK4 312 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 FAM210AQ96ND0 272 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 QKIQ96PU8 341 aaKnown RBP eCLIP1.98□□□□□ -2.09
BRCA2-203ENST00000528762 ZNF251Q9BRH9 671 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 MFSD1Q9H3U5 465 aa1.98□□□□□ -2.09
BRCA2-203ENST00000528762 DSN1Q9H410 356 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms