RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 TK1P04183 234 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 HTR1AP08908 422 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 BCL3P20749 454 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 MDKP21741 143 aaPredicted RBP8.69□□□□□ -1.02
CD44-227ENST00000528086 DUSP1P28562 367 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 IER3P46695 156 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 FUT6P51993 359 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 ZP1P60852 638 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 COL10A1Q03692 680 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 SRSF4Q08170 494 aaKnown RBP8.69□□□□□ -1.02
CD44-227ENST00000528086 RAB40BQ12829 278 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 RCN1Q15293 331 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 ZSCAN26Q16670 478 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 SMIM21Q3B7S5 101 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 OR2G6Q5TZ20 316 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 TMEM244Q5VVB8 128 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 ZNF529Q6P280 563 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 RBMS3Q6XE24 437 aaKnown RBP8.69□□□□□ -1.02
CD44-227ENST00000528086 MKXQ8IYA7 352 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 DYNAPQ8N1N2 210 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 CCDC54Q8NEL0 328 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 DNAAF1Q8NEP3 725 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 FBLIM1Q8WUP2 373 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 RFT1Q96AA3 541 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 C10orf35Q96D05 121 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 CEP19Q96LK0 163 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 NKX3-1Q99801 234 aaPredicted RBP8.69□□□□□ -1.02
CD44-227ENST00000528086 NOX4Q9NPH5 578 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 C1RLQ9NZP8 487 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 OR14J1Q9UGF5 321 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 TRBV23-1A0A0A0MS06 115 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 CASQ2O14958 399 aaPredicted RBP8.68□□□□□ -1.02
CD44-227ENST00000528086 NPFFO15130 113 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 ANGPTL7O43827 346 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 MPZL2O60487 215 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 MT-ND2P03891 347 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 AZGP1P25311 298 aaKnown RBP8.68□□□□□ -1.02
CD44-227ENST00000528086 SAA4P35542 130 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 PDZK1IP1Q13113 114 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 UTF1Q5T230 341 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 OGFRL1Q5TC84 451 aaPredicted RBP8.68□□□□□ -1.02
CD44-227ENST00000528086 FIP1L1Q6UN15 594 aaKnown RBP8.68□□□□□ -1.02
CD44-227ENST00000528086 FAM220AQ7Z4H9 259 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 C10orf67Q8IYJ2 551 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 ZNF561Q8N587 486 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 OR51A2Q8NGJ7 313 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 PIFOQ8TCI5 191 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 PP6455Q8WZ26 134 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 SLC25A28Q96A46 364 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 ORAI1Q96D31 301 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 RDH12Q96NR8 316 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 ZNF747Q9BV97 191 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 ZMAT3Q9HA38 289 aaKnown RBP8.68□□□□□ -1.02
CD44-227ENST00000528086 SEBOXQ9HB31 216 aaPredicted RBP8.68□□□□□ -1.02
CD44-227ENST00000528086 ZNF581Q9P0T4 197 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 ZNRD1Q9P1U0 126 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 HHLA2Q9UM44 414 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 POLDIP2Q9Y2S7 368 aa8.68□□□□□ -1.02
CD44-227ENST00000528086 C17orf98A8MV24 154 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 GATBO75879 557 aaKnown RBP8.67□□□□□ -1.02
CD44-227ENST00000528086 MMP23AO75900 390 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 FADS2O95864 444 aaKnown RBP8.67□□□□□ -1.02
CD44-227ENST00000528086 PIPP12273 146 aaPredicted RBP8.67□□□□□ -1.02
CD44-227ENST00000528086 UBE2E1P51965 193 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 RPS11P62280 158 aaKnown RBP eCLIP8.67□□□□□ -1.02
CD44-227ENST00000528086 ACTA2P62736 377 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 RPL31P62899 125 aaKnown RBP8.67□□□□□ -1.02
CD44-227ENST00000528086 ACTG2P63267 376 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 IL18R1Q13478 541 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 ZNF146Q15072 292 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 Q6P435 159 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 BAIAP2L2Q6UXY1 529 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 EGFL6Q8IUX8 553 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 FAM185AQ8N0U4 392 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 PARP16Q8N5Y8 322 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 TMEM86BQ8N661 226 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 TPRX1Q8N7U7 411 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 OR4S1Q8NGB4 309 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 OR5D18Q8NGL1 313 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 OR13C5Q8NGS8 318 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 OR13C9Q8NGT0 318 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 NRG4Q8WWG1 115 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 GGHQ92820 318 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 BORCS8Q96FH0 119 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 CYYR1Q96J86 154 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 Q96MT0 163 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 OPALINQ96PE5 141 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 ADI1Q9BV57 179 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 METTL8Q9H825 291 aaKnown RBP8.67□□□□□ -1.02
CD44-227ENST00000528086 PLEKHA1Q9HB21 404 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 INPP5EQ9NRR6 644 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 SLC7A11Q9UPY5 501 aa8.67□□□□□ -1.02
CD44-227ENST00000528086 RPL36Q9Y3U8 105 aaKnown RBP8.67□□□□□ -1.02
CD44-227ENST00000528086 TRBV2A0A0J9YWF9 115 aa8.66□□□□□ -1.02
CD44-227ENST00000528086 A0A1W2PQ09 198 aa8.66□□□□□ -1.02
CD44-227ENST00000528086 FAM90A8PA6NJQ4 464 aa8.66□□□□□ -1.02
CD44-227ENST00000528086 OGG1O15527 345 aa8.66□□□□□ -1.02
CD44-227ENST00000528086 GPR137BO60478 399 aa8.66□□□□□ -1.02
CD44-227ENST00000528086 KDM4BO94953 1096 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms