RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 CCBE1Q6UXH8 406 aaPredicted RBP8.55□□□□□ -1.04
CPSF1-203ENST00000527916 NDUFA11Q86Y39 141 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 LYG1Q8N1E2 194 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 TMEM185AQ8NFB2 350 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 TBX5Q99593 518 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 ADI1Q9BV57 179 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 RIBC2Q9H4K1 309 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 GPR173Q9NS66 373 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 SLC7A11Q9UPY5 501 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 SF3B6Q9Y3B4 125 aaKnown RBP8.55□□□□□ -1.04
CPSF1-203ENST00000527916 hCG_1809904A0A1W2PP81 198 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 A0A1W2PPE2 198 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 A0A1W2PR64 198 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 A0A1W2PRV1 198 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 SAC3D1A6NKF1 404 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 H0YAE9 185 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 H3BUX3 64 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 J3QRE1 110 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 SYT7O43581 403 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 GATBO75879 557 aaKnown RBP8.54□□□□□ -1.04
CPSF1-203ENST00000527916 NXPH2O95156 264 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 SERPINA3P01011 423 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 TK1P04183 234 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 ISG15P05161 165 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 UBCP0CG48 685 aaKnown RBP8.54□□□□□ -1.04
CPSF1-203ENST00000527916 SAA4P35542 130 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 FUT6P51993 359 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 RPL31P62899 125 aaKnown RBP8.54□□□□□ -1.04
CPSF1-203ENST00000527916 ACTC1P68032 377 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 ACTA1P68133 377 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 ZNF85Q03923 595 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 UBE2V2Q15819 145 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 TMEM244Q5VVB8 128 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 TMEM200BQ69YZ2 307 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 HCP5Q6MZN7 132 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 ANGPTL5Q86XS5 388 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 C11orf42Q8N5U0 333 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 BEND2Q8NDZ0 799 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 DNAAF1Q8NEP3 725 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 OR10H4Q8NGA5 316 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 PPP1R35Q8TAP8 253 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 PYDC1Q8WXC3 89 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 PP6455Q8WZ26 134 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 ZNF488Q96MN9 340 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 NPFFR1Q9GZQ6 430 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 CHST5Q9GZS9 411 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 MEGF9Q9H1U4 602 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 PLEKHA1Q9HB21 404 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 IMPAD1Q9NX62 359 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 ORC6Q9Y5N6 252 aa8.54□□□□□ -1.04
CPSF1-203ENST00000527916 A6NIN4 97 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 SNTNA6NMZ2 147 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 H3BNX3 289 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 K7N7A8 449 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 CHRM2P08172 466 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 IGLL1P15814 213 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 ALDH3A2P51648 485 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 CCR9P51686 369 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 DLX1P56177 255 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 KLRD1Q13241 179 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 DCTN2Q13561 401 aaKnown RBP8.53□□□□□ -1.04
CPSF1-203ENST00000527916 KPNB1Q14974 876 aaKnown RBP8.53□□□□□ -1.04
CPSF1-203ENST00000527916 AANATQ16613 207 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 FAM220AQ7Z4H9 259 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 PRSS35Q8N3Z0 413 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 WFDC9Q8NEX5 89 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 RNF166Q96A37 237 aaPredicted RBP8.53□□□□□ -1.04
CPSF1-203ENST00000527916 MYCBPQ99417 103 aaPredicted RBP8.53□□□□□ -1.04
CPSF1-203ENST00000527916 SSX3Q99909 188 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 B9D2Q9BPU9 175 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 HEXA-AS1Q9H8Q6 139 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 ELL3Q9HB65 397 aaPredicted RBP8.53□□□□□ -1.04
CPSF1-203ENST00000527916 C19orf12Q9NSK7 152 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 MTCH1Q9NZJ7 389 aa8.53□□□□□ -1.04
CPSF1-203ENST00000527916 EXOGQ9Y2C4 368 aaKnown RBP8.53□□□□□ -1.04
CPSF1-203ENST00000527916 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 FAM230AA0A1W2PPH8 454 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 A0A1W2PRD5 423 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 A0A1W2PRF3 423 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 A0A1W2PRM7 423 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 DAPL1A0PJW8 107 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 C17orf98A8MV24 154 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 EI24O14681 340 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 ENTPD6O75354 484 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 PEX14O75381 377 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 APOL3O95236 402 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 RBP4P02753 201 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 RPSAP08865 295 aaKnown RBP8.52□□□□□ -1.05
CPSF1-203ENST00000527916 CAPZA1P52907 286 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 COL10A1Q03692 680 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 CNN3Q15417 329 aaKnown RBP8.52□□□□□ -1.05
CPSF1-203ENST00000527916 LY6EQ16553 131 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 ODF4Q2M2E3 257 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 KLHL22Q53GT1 634 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 LIAT1Q6ZQX7 453 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 CCDC121Q6ZUS5 278 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 UTS2BQ765I0 119 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 MKXQ8IYA7 352 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 Q8IYB0 196 aa8.52□□□□□ -1.05
CPSF1-203ENST00000527916 FAM185AQ8N0U4 392 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms