RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 TM2D1Q9BX74 207 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 OPA3Q9H6K4 179 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 CRIM1Q9NZV1 1036 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 FZR1Q9UM11 496 aa16.04■□□□□ 0.16
SMPD1-203ENST00000527275 ZNF850A8MQ14 1090 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 SIAH2O43255 324 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 SPRY1O43609 319 aaPredicted RBP16.03■□□□□ 0.16
SMPD1-203ENST00000527275 ANGPTL7O43827 346 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 SSX5O60225 188 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 MPV17P39210 176 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 FABP6P51161 128 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 PSG7Q13046 419 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 METTL11BQ5VVY1 283 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 OR2T2Q6IF00 324 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 IFT46Q9NQC8 304 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 CD300LBA8K4G0 201 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 PLATP00750 562 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 ANXA7P20073 488 aaKnown RBP16.03■□□□□ 0.16
SMPD1-203ENST00000527275 GLRXP35754 106 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 MECP2P51608 486 aaKnown RBP16.03■□□□□ 0.16
SMPD1-203ENST00000527275 MAB21L1Q13394 359 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 RSU1Q15404 277 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 PNLIPRP3Q17RR3 467 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 VHLLQ6RSH7 139 aa16.03■□□□□ 0.16
SMPD1-203ENST00000527275 FOXI3A8MTJ6 420 aaPredicted RBP16.02■□□□□ 0.16
SMPD1-203ENST00000527275 SSNA1O43805 119 aa16.02■□□□□ 0.16
SMPD1-203ENST00000527275 LILRA1O75019 489 aa16.02■□□□□ 0.16
SMPD1-203ENST00000527275 CSTBP04080 98 aaKnown RBP16.02■□□□□ 0.16
SMPD1-203ENST00000527275 AMY2AP04746 511 aa16.02■□□□□ 0.16
SMPD1-203ENST00000527275 PLA2G2AP14555 144 aa16.02■□□□□ 0.16
SMPD1-203ENST00000527275 RAC2P15153 192 aa16.02■□□□□ 0.16
SMPD1-203ENST00000527275 CPT2P23786 658 aa16.02■□□□□ 0.16
SMPD1-203ENST00000527275 BLVRBP30043 206 aaPredicted RBP16.02■□□□□ 0.16
SMPD1-203ENST00000527275 MSMPQ1L6U9 139 aa16.02■□□□□ 0.16
SMPD1-203ENST00000527275 RGS7BPQ6MZT1 257 aaPredicted RBP16.02■□□□□ 0.16
SMPD1-203ENST00000527275 ASCL4Q6XD76 172 aa16.02■□□□□ 0.16
SMPD1-203ENST00000527275 GLDNQ6ZMI3 551 aaPredicted RBP16.02■□□□□ 0.16
SMPD1-203ENST00000527275 NOXA1Q86UR1 476 aa16.02■□□□□ 0.16
SMPD1-203ENST00000527275 C1orf174Q8IYL3 243 aa16.02■□□□□ 0.16
SMPD1-203ENST00000527275 TMEM171Q8WVE6 324 aa16.02■□□□□ 0.16
SMPD1-203ENST00000527275 MED30Q96HR3 178 aa16.02■□□□□ 0.16
SMPD1-203ENST00000527275 MFNGO00587 321 aa16.02■□□□□ 0.15
SMPD1-203ENST00000527275 HTR3BO95264 441 aa16.02■□□□□ 0.15
SMPD1-203ENST00000527275 ZNF735P0CB33 412 aa16.02■□□□□ 0.15
SMPD1-203ENST00000527275 TUBG1P23258 451 aa16.02■□□□□ 0.15
SMPD1-203ENST00000527275 ALKBH6Q3KRA9 238 aa16.02■□□□□ 0.15
SMPD1-203ENST00000527275 ZNF718Q3SXZ3 478 aa16.02■□□□□ 0.15
SMPD1-203ENST00000527275 BPIFB2Q8N4F0 458 aa16.02■□□□□ 0.15
SMPD1-203ENST00000527275 OR11H7Q8NGC8 314 aa16.02■□□□□ 0.15
SMPD1-203ENST00000527275 TUBG2Q9NRH3 451 aa16.02■□□□□ 0.15
SMPD1-203ENST00000527275 CA10Q9NS85 328 aa16.02■□□□□ 0.15
SMPD1-203ENST00000527275 GPR160Q9UJ42 338 aa16.02■□□□□ 0.15
SMPD1-203ENST00000527275 PKDREJQ9NTG1 2253 aa16.01■□□□□ 0.15
SMPD1-203ENST00000527275 DEFB108AA8MXU0 73 aa16.01■□□□□ 0.15
SMPD1-203ENST00000527275 IL5P05113 134 aa16.01■□□□□ 0.15
SMPD1-203ENST00000527275 IGFBP2P18065 325 aa16.01■□□□□ 0.15
SMPD1-203ENST00000527275 MEF2DQ14814 521 aa16.01■□□□□ 0.15
SMPD1-203ENST00000527275 BEX5Q5H9J7 111 aa16.01■□□□□ 0.15
SMPD1-203ENST00000527275 OR52W1Q6IF63 320 aa16.01■□□□□ 0.15
SMPD1-203ENST00000527275 IDO2Q6ZQW0 420 aa16.01■□□□□ 0.15
SMPD1-203ENST00000527275 ZNF486Q96H40 463 aaPredicted RBP16.01■□□□□ 0.15
SMPD1-203ENST00000527275 SEC22CQ9BRL7 303 aa16.01■□□□□ 0.15
SMPD1-203ENST00000527275 PAPOLGQ9BWT3 736 aaKnown RBP16.01■□□□□ 0.15
SMPD1-203ENST00000527275 SCP2D1Q9UJQ7 156 aa16.01■□□□□ 0.15
SMPD1-203ENST00000527275 DISC1C4P0D8 188 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 ZNF780AO75290 641 aaPredicted RBP16■□□□□ 0.15
SMPD1-203ENST00000527275 RLN1P04808 185 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 GCH1P30793 250 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 PDZK1IP1Q13113 114 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 ARFRP1Q13795 201 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 RNASE10Q5GAN6 216 aaKnown RBP16■□□□□ 0.15
SMPD1-203ENST00000527275 MBNL2Q5VZF2 373 aaKnown RBP16■□□□□ 0.15
SMPD1-203ENST00000527275 DMRTC2Q8IXT2 367 aaPredicted RBP16■□□□□ 0.15
SMPD1-203ENST00000527275 CSNK2A3Q8NEV1 391 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 NUP37Q8NFH4 326 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 Q96M66 194 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 SLC6A7Q99884 636 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 PECRQ9BY49 303 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16■□□□□ 0.15
SMPD1-203ENST00000527275 DUSP13Q9UII6 198 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 ZNF222Q9UK12 451 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 SHISA9B4DS77 424 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 CST4P01036 141 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 CD3EP07766 207 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 PRDX4Q13162 271 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 FTMTQ8N4E7 242 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 PXT1Q8NFP0 134 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 CYYR1Q96J86 154 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 HS3ST6Q96QI5 342 aa16■□□□□ 0.15
SMPD1-203ENST00000527275 SLC25A21Q9BQT8 299 aaPredicted RBP16■□□□□ 0.15
SMPD1-203ENST00000527275 GPN1Q9HCN4 374 aaPredicted RBP16■□□□□ 0.15
SMPD1-203ENST00000527275 IGKV1-12A0A0C4DH73 117 aa15.99■□□□□ 0.15
SMPD1-203ENST00000527275 J3QKU1 62 aa15.99■□□□□ 0.15
SMPD1-203ENST00000527275 IGKV1D-12P01611 117 aa15.99■□□□□ 0.15
SMPD1-203ENST00000527275 CSN2P05814 226 aa15.99■□□□□ 0.15
SMPD1-203ENST00000527275 SULT1A3P0DMM9 295 aa15.99■□□□□ 0.15
SMPD1-203ENST00000527275 SULT1A4P0DMN0 295 aa15.99■□□□□ 0.15
SMPD1-203ENST00000527275 ZNF250P15622 560 aa15.99■□□□□ 0.15
SMPD1-203ENST00000527275 CXCL3P19876 107 aa15.99■□□□□ 0.15
SMPD1-203ENST00000527275 GABRR1P24046 479 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms