RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 PPOXP50336 477 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 ERFP50548 548 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 NANOS3P60323 173 aaKnown RBP4.05□□□□□ -1.76
USP47-204ENST00000525078 MAPK14Q16539 360 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 C6orf99Q4VX62 202 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 KDM4DQ6B0I6 523 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 SPNS3Q6ZMD2 512 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 SMIM15Q7Z3B0 74 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 GID4Q8IVV7 300 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 ZCCHC24Q8N2G6 241 aaKnown RBP4.05□□□□□ -1.76
USP47-204ENST00000525078 ZNF680Q8NEM1 530 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 PXT1Q8NFP0 134 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 OR10G6Q8NH81 332 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 ACTRT1Q8TDG2 376 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 NEK7Q8TDX7 302 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 SLC37A2Q8TED4 501 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 C7orf33Q8WU49 177 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 DCUN1D4Q92564 292 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 ZBTB9Q96C00 473 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 IMP4Q96G21 291 aaKnown RBP4.05□□□□□ -1.76
USP47-204ENST00000525078 OR10C1Q96KK4 312 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 DUX3Q96PT4 197 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 PRRT1Q99946 306 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 NRIP2Q9BQI9 281 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 TMEM243Q9BU79 118 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 SLC25A31Q9H0C2 315 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 PARP12Q9H0J9 701 aaKnown RBP4.05□□□□□ -1.76
USP47-204ENST00000525078 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 NEUROG3Q9Y4Z2 214 aa4.05□□□□□ -1.76
USP47-204ENST00000525078 NPHP4O75161 1426 aaPredicted RBP4.04□□□□□ -1.76
USP47-204ENST00000525078 TGIF2-C20orf24A0A0A6YYL0 155 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 CENPVL3A0A0U1RRI6 287 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 UPK2O00526 184 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 MFNGO00587 321 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 FOXH1O75593 365 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 MT-ND4P03905 459 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 TDGF1P13385 188 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 MYL12AP19105 171 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 CFL1P23528 166 aaKnown RBP4.04□□□□□ -1.76
USP47-204ENST00000525078 CCR7P32248 378 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 TDGF1P3P51864 188 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 SLC18A1P54219 525 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 FMODQ06828 376 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 ZNF658BQ4V348 819 aaPredicted RBP4.04□□□□□ -1.76
USP47-204ENST00000525078 ORMDL2Q53FV1 153 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 TMEM255AQ5JRV8 349 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 HES5Q5TA89 166 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 C1orf195Q5TG92 126 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 MARC1Q5VT66 337 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 ZNF613Q6PF04 617 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 SLC51BQ86UW2 128 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 NR2C2APQ86WQ0 139 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 NIT1Q86X76 327 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 ZNF420Q8TAQ5 688 aaPredicted RBP4.04□□□□□ -1.76
USP47-204ENST00000525078 DCAKDQ8WVC6 231 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 RAD51AP1Q96B01 352 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 FMC1Q96HJ9 113 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 LINC00479Q96M42 142 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 SDHCQ99643 169 aaPredicted RBP4.04□□□□□ -1.76
USP47-204ENST00000525078 MROQ9BYG7 248 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 SLC25A39Q9BZJ4 359 aaPredicted RBP4.04□□□□□ -1.76
USP47-204ENST00000525078 TSGA10Q9BZW7 698 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 OR51E2Q9H255 320 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 GNB4Q9HAV0 340 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 C8orf4Q9NR00 106 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 GLTPQ9NZD2 209 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 TMEM9Q9P0T7 183 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 DEC1Q9P2X7 70 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 RAB26Q9ULW5 256 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 PSG8Q9UQ74 426 aa4.04□□□□□ -1.76
USP47-204ENST00000525078 TRAV19A0A0A6YYK7 116 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 IGKV1-8A0A0C4DH67 115 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 H3BP45 60 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 NPIPB7O75200 414 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 SPAG7O75391 227 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 ZNF432O94892 652 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 HLA-DPB1P04440 258 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 ZDHHC11BP0C7U3 371 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 TGFBR2P37173 567 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 RPL23P62829 140 aaKnown RBP4.03□□□□□ -1.76
USP47-204ENST00000525078 ADIGQ0VDE8 80 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 ZNF235Q14590 738 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 LRRC26Q2I0M4 334 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 CGB2Q6NT52 195 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 ZNF343Q6P1L6 599 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 OPN5Q6U736 354 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 Q6ZSR6 202 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 NCCRP1Q6ZVX7 275 aaPredicted RBP4.03□□□□□ -1.76
USP47-204ENST00000525078 UBALD2Q8IYN6 164 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 SLC26A10Q8NG04 563 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 GPR32P1Q8NGA4 272 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 LRRC58Q96CX6 371 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 SMARCD1Q96GM5 515 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 ZIM3Q96PE6 472 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 SPACA5Q96QH8 159 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 MRPL20Q9BYC9 149 aaKnown RBP4.03□□□□□ -1.76
USP47-204ENST00000525078 XPNPEP1Q9NQW7 623 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 VNN3Q9NY84 501 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 VPS29Q9UBQ0 182 aa4.03□□□□□ -1.76
USP47-204ENST00000525078 TRAPPC4Q9Y296 219 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms