RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 LHX2P50458 406 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 MALLQ13021 153 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 SMCO1Q147U7 214 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 DHRS7BQ6IAN0 325 aaPredicted RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 ZNF774Q6NX45 483 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 LIAT1Q6ZQX7 453 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 RTN4RL2Q86UN3 420 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 RELL2Q8NC24 303 aaPredicted RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 CLRN3Q8NCR9 226 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 OR8G5Q8NG78 346 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 CMSS1Q9BQ75 279 aaKnown RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 ZNF2Q9BSG1 426 aaPredicted RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 ZNF703Q9H7S9 590 aaPredicted RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 METTL8Q9H825 291 aaKnown RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 GPR173Q9NS66 373 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 ABI3Q9P2A4 366 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 PURGQ9UJV8 347 aaKnown RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 NSG2Q9Y328 171 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 RALGAPA1Q6GYQ0 2036 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 IGHV3-15A0A0B4J1V0 119 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 C13orf42A0A1B0GVH6 325 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 FAM25EA8MYX2 175 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 NPIPB11E5RHQ5 1161 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 ATP6V1G2-DDX39BF2Z307 99 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 CXCL13O43927 109 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 LCATP04180 440 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 DBHP09172 617 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 ZNF728P0DKX0 622 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 SLC25A6P12236 298 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 MPLP40238 635 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 HTR5AP47898 357 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 KCNJ3P48549 501 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 CAV2P51636 162 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 CLDN18P56856 261 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 FGF12P61328 243 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 S100A12P80511 92 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 RAB32Q13637 225 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 RNPS1Q15287 305 aaKnown RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 SLC9A3R2Q15599 337 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 CEACAM16Q2WEN9 425 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 BTNL8Q6UX41 500 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 C6orf201Q7Z4U5 140 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 PIP4P1Q86T03 277 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 SKA3Q8IX90 412 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 LGI3Q8N145 548 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 OR10AD1Q8NGE0 317 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 OR1S2Q8NGQ3 325 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 MSI2Q96DH6 328 aaKnown RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 ZNF837Q96EG3 531 aaPredicted RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 MARS2Q96GW9 593 aaKnown RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 TMEM56Q96MV1 263 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 GINS3Q9BRX5 216 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 NKX6-2Q9C056 277 aaPredicted RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 C11orf1Q9H5F2 150 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 SPACA1Q9HBV2 294 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 P4HTMQ9NXG6 502 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 OR5AC2Q9NZP5 309 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 ZNF629Q9UEG4 869 aaPredicted RBP4.72□□□□□ -1.65
CLINT1-208ENST00000524306 NDRG3Q9UGV2 375 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 TMEM56-RWDD3S4R434 201 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 CEP290O15078 2479 aa4.72□□□□□ -1.65
CLINT1-208ENST00000524306 IGKV1D-8A0A087WSZ0 117 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 IGKV1-12A0A0C4DH73 117 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 GPR137BO60478 399 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 ADAP1O75689 374 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 SCO1O75880 301 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 HTR3BO95264 441 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 NAPSAO96009 420 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 ACTL6AO96019 429 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 IGKV1D-12P01611 117 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 CD5P06127 495 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 ACAA1P09110 424 aaPredicted RBP4.71□□□□□ -1.66
CLINT1-208ENST00000524306 LIPCP11150 499 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 EDN3P14138 238 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 SOX8P57073 446 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 FLI1Q01543 452 aaPredicted RBP4.71□□□□□ -1.66
CLINT1-208ENST00000524306 ZNF92Q03936 586 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 ZNF169Q14929 603 aaPredicted RBP4.71□□□□□ -1.66
CLINT1-208ENST00000524306 DAZAP2Q15038 168 aaPredicted RBP4.71□□□□□ -1.66
CLINT1-208ENST00000524306 CEACAM21Q3KPI0 293 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 LRRC37A5PQ49AS3 106 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 SHEQ5VZ18 495 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 GGNBP1Q5YKI7 109 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 ZNF585AQ6P3V2 769 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 ZNF880Q6PDB4 577 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 OR2M7Q8NG81 312 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 OR5A2Q8NGI9 324 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 APOBEC3DQ96AK3 386 aaPredicted RBP4.71□□□□□ -1.66
CLINT1-208ENST00000524306 LRRC46Q96FV0 321 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 SULT4A1Q9BR01 284 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 PKIBQ9C010 78 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 ACKR4Q9NPB9 350 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 PRDM6Q9NQX0 595 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 DEPPQ9NTK1 212 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 TREM2Q9NZC2 230 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 AMDHD2Q9Y303 409 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 STRAPQ9Y3F4 350 aaKnown RBP4.71□□□□□ -1.66
CLINT1-208ENST00000524306 UNC13CQ8NB66 2214 aa4.71□□□□□ -1.66
CLINT1-208ENST00000524306 TNRC6AQ8NDV7 1962 aaKnown RBP4.71□□□□□ -1.66
CLINT1-208ENST00000524306 LOC100509620A0A075B734 347 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms