RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 H2AFY2Q9P0M6 372 aaPredicted RBP12.43□□□□□ -0.42
MRPS28-209ENST00000522987 TMEM82A0PJX8 343 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 FAM172BPA6NC97 362 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 ADARB2-AS1A8MUL3 147 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 ODF3BA8MYP8 253 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 F2RL2O00254 374 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 ALX3O95076 343 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 IGHA1P01876 353 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 IGHV1-8P0DP01 117 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 CD24P25063 80 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 MPZP25189 248 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 ERVK11-1P61568 191 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 ACTA2P62736 377 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 ACTG2P63267 376 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 ACTC1P68032 377 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 ACTA1P68133 377 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 SLC34A1Q06495 639 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 UBE2V2Q15819 145 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 LIAT1Q6ZQX7 453 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 OR4S1Q8NGB4 309 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 NDNFQ8TB73 568 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 PRSS22Q9GZN4 317 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 PLEKHA1Q9HB21 404 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 AURKAIP1Q9NWT8 199 aaPredicted RBP12.42□□□□□ -0.42
MRPS28-209ENST00000522987 MTCH1Q9NZJ7 389 aa12.42□□□□□ -0.42
MRPS28-209ENST00000522987 ZNF737O75373 536 aa12.41□□□□□ -0.42
MRPS28-209ENST00000522987 ZNF626Q68DY1 528 aa12.41□□□□□ -0.42
MRPS28-209ENST00000522987 BAIAP2L2Q6UXY1 529 aa12.41□□□□□ -0.42
MRPS28-209ENST00000522987 SLC25A26Q70HW3 274 aa12.41□□□□□ -0.42
MRPS28-209ENST00000522987 ZNF676Q8N7Q3 588 aa12.41□□□□□ -0.42
MRPS28-209ENST00000522987 EMG1Q92979 244 aaKnown RBP12.41□□□□□ -0.42
MRPS28-209ENST00000522987 PHF21AQ96BD5 680 aa12.41□□□□□ -0.42
MRPS28-209ENST00000522987 FOXRED1Q96CU9 486 aaPredicted RBP12.41□□□□□ -0.42
MRPS28-209ENST00000522987 CEP19Q96LK0 163 aa12.41□□□□□ -0.42
MRPS28-209ENST00000522987 ZNF714Q96N38 554 aa12.41□□□□□ -0.42
MRPS28-209ENST00000522987 MOB1AQ9H8S9 216 aa12.41□□□□□ -0.42
MRPS28-209ENST00000522987 SLC7A11Q9UPY5 501 aa12.41□□□□□ -0.42
MRPS28-209ENST00000522987 TBL2Q9Y4P3 447 aaKnown RBP12.41□□□□□ -0.42
MRPS28-209ENST00000522987 SNX5Q9Y5X3 404 aa12.41□□□□□ -0.42
MRPS28-209ENST00000522987 TCRBV3S1A0A5B6 114 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 SH2D7A6NKC9 451 aaPredicted RBP12.4□□□□□ -0.42
MRPS28-209ENST00000522987 VGLL3A8MV65 326 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 GYG2O15488 501 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 MMP23AO75900 390 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 FAM107AO95990 144 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 CHRM2P08172 466 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 IGLL1P15814 213 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 GABRR1P24046 479 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 VDAC2P45880 294 aaPredicted RBP12.4□□□□□ -0.42
MRPS28-209ENST00000522987 POU3F4P49335 361 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 OR12D2P58182 307 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 EMX1Q04741 257 aaPredicted RBP12.4□□□□□ -0.42
MRPS28-209ENST00000522987 IL24Q13007 206 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 AADACL4Q5VUY2 407 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 FAHD1Q6P587 224 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 NDUFA11Q86Y39 141 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 EGFL6Q8IUX8 553 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 OR8H2Q8N162 312 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 Q8N2B8 174 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 OR52N4Q8NGI2 321 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 TMEM163Q8TC26 289 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 MALSU1Q96EH3 234 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 PKIBQ9C010 78 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 KRT84Q9NSB2 600 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 CLN6Q9NWW5 311 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.4□□□□□ -0.42
MRPS28-209ENST00000522987 POMPQ9Y244 141 aa12.4□□□□□ -0.42
MRPS28-209ENST00000522987 SYT7O43581 403 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 XPNPEP2O43895 674 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 HAND1O96004 215 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 KRT8P05787 483 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 NPBWR2P48146 333 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 LOXL3P58215 753 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 ACTR3P61158 418 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 GRK1Q15835 563 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 SLX4IPQ5VYV7 408 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 TRAPPC6BQ86SZ2 158 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 CATSPERDQ86XM0 798 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 RDH10Q8IZV5 341 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 OR4F17Q8NGA8 305 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 OR11H6Q8NGC7 330 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 RFT1Q96AA3 541 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 OR4F4Q96R69 305 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 RBFOX1Q9NWB1 397 aaKnown RBP12.39□□□□□ -0.43
MRPS28-209ENST00000522987 ING3Q9NXR8 418 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 PITPNC1Q9UKF7 332 aa12.39□□□□□ -0.43
MRPS28-209ENST00000522987 IGHV2-26A0A0B4J1V2 119 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 A0A1W2PQL4 384 aaPredicted RBP12.38□□□□□ -0.43
MRPS28-209ENST00000522987 SIRPB1O00241 398 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 MPIG6BO95866 241 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 CD33P20138 364 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 BCL3P20749 454 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 PRAMEF5Q5TYX0 476 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 FOXB2Q5VYV0 432 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 NXNL2Q5VZ03 156 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 C12orf73Q69YU5 71 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 CCDC121Q6ZUS5 278 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 REC114Q7Z4M0 266 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 OR10H4Q8NGA5 316 aa12.38□□□□□ -0.43
MRPS28-209ENST00000522987 OR5AU1Q8NGC0 362 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms