RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 UBDO15205 165 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 CD14P08571 375 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 HCKP08631 526 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 AZGP1P25311 298 aaKnown RBP4.94□□□□□ -1.62
VPS13B-211ENST00000522802 RPS27P42677 84 aaKnown RBP4.94□□□□□ -1.62
VPS13B-211ENST00000522802 GABRA2P47869 451 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 SLC25A1P53007 311 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 SLC18A1P54219 525 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 DLX6P56179 175 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 RPL31P62899 125 aaKnown RBP4.94□□□□□ -1.62
VPS13B-211ENST00000522802 SLC34A1Q06495 639 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 MZT1Q08AG7 82 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 STX3Q13277 289 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 C9orf66Q5T8R8 295 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 TSEN54Q7Z6J9 526 aaKnown RBP4.94□□□□□ -1.62
VPS13B-211ENST00000522802 PATL1Q86TB9 770 aaKnown RBP4.94□□□□□ -1.62
VPS13B-211ENST00000522802 EGFL6Q8IUX8 553 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 KIRREL3Q8IZU9 778 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 DPP10Q8N608 796 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 MNS1Q8NEH6 495 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 OR4M1Q8NGD0 313 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 RPL3LQ92901 407 aaKnown RBP4.94□□□□□ -1.62
VPS13B-211ENST00000522802 MALSU1Q96EH3 234 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 MED30Q96HR3 178 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 TM2D3Q9BRN9 247 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 NMNAT1Q9HAN9 279 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-211ENST00000522802 USE1Q9NZ43 259 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 NLKQ9UBE8 527 aa4.94□□□□□ -1.62
VPS13B-211ENST00000522802 TBL2Q9Y4P3 447 aaKnown RBP4.94□□□□□ -1.62
VPS13B-211ENST00000522802 ANKRD30BLA7E2S9 258 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 EVPLLA8MZ36 301 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 CCL24O00175 119 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 AHCYL1O43865 530 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 NDUFB8O95169 186 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 VIMP08670 466 aaKnown RBP4.93□□□□□ -1.62
VPS13B-211ENST00000522802 PGA5P0DJD9 388 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 PSG2P11465 335 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 PIPP12273 146 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-211ENST00000522802 OTX1P32242 354 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-211ENST00000522802 MDH1P40925 334 aaKnown RBP4.93□□□□□ -1.62
VPS13B-211ENST00000522802 NAA10P41227 235 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-211ENST00000522802 CDKN2AP42771 156 aaKnown RBP4.93□□□□□ -1.62
VPS13B-211ENST00000522802 OR3A4PP47883 348 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 VEGFCP49767 419 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 CAPZA1P52907 286 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 OR12D2P58182 307 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 FXYD6P3P58550 94 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 SPIBQ01892 262 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 DYNC1I2Q13409 638 aaKnown RBP4.93□□□□□ -1.62
VPS13B-211ENST00000522802 AGBL2Q5U5Z8 902 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 DLEU7Q6UYE1 221 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 SLC16A9Q7RTY1 509 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 ADCK1Q86TW2 530 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 ZNF695Q8IW36 515 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 OR6V1Q8N148 313 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 OR5M8Q8NGP6 311 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 OR4Q3Q8NH05 313 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 SLC26A7Q8TE54 656 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 HPSE2Q8WWQ2 592 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 SPDL1Q96EA4 605 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 RNFT2Q96EX2 444 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 NOL4LQ96MY1 436 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-211ENST00000522802 SLC25A33Q9BSK2 321 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 PAPOLGQ9BWT3 736 aaKnown RBP4.93□□□□□ -1.62
VPS13B-211ENST00000522802 POLR2J2Q9GZM3 115 aaKnown RBP4.93□□□□□ -1.62
VPS13B-211ENST00000522802 CTDSP1Q9GZU7 261 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 POLR2J3Q9H1A7 115 aaKnown RBP4.93□□□□□ -1.62
VPS13B-211ENST00000522802 FN3KQ9H479 309 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 YY1AP1Q9H869 796 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 VNN3Q9NY84 501 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 CCDC167Q9P0B6 97 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-211ENST00000522802 RHCGQ9UBD6 479 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 CYB5R1Q9UHQ9 305 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 A4GNTQ9UNA3 340 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 LRP12Q9Y561 859 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 N6AMT1Q9Y5N5 214 aa4.93□□□□□ -1.62
VPS13B-211ENST00000522802 IGLV5-39A0A0G2JS06 123 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 TMEM272A0A1B0GTI8 110 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 hCG_38984A0A1B0GV85 526 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 TRIM64CA6NLI5 447 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 PRR23D1E9PI22 279 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-211ENST00000522802 SNNO75324 88 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-211ENST00000522802 TIPRLO75663 272 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 PRR23D2P0DMB1 279 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-211ENST00000522802 IGHV1-8P0DP01 117 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 DCTDP32321 178 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 YAP1P46937 504 aaKnown RBP4.92□□□□□ -1.62
VPS13B-211ENST00000522802 FAM3AP98173 230 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 PRKCDQ05655 676 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 IL13RA2Q14627 380 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 ZNF260Q3ZCT1 412 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 ANKDD1AQ495B1 522 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 KLHL12Q53G59 568 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 C9orf152Q5JTZ5 239 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 ZNF770Q6IQ21 691 aaPredicted RBP4.92□□□□□ -1.62
VPS13B-211ENST00000522802 TBPL2Q6SJ96 375 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 TMPRSS11FQ6ZWK6 438 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 TCF23Q7RTU1 214 aa4.92□□□□□ -1.62
VPS13B-211ENST00000522802 C16orf82Q7Z2V1 217 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms