RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TRAF4Q9BUZ4 470 aaPredicted RBP11.05□□□□□ -0.64
CPNE3-205ENST00000522240 EGLN1Q9GZT9 426 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 LPAR5Q9H1C0 372 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 FN3KRPQ9HA64 309 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 MTCH1Q9NZJ7 389 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 EXTL2Q9UBQ6 330 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 V9GYH0 126 aa11.05□□□□□ -0.64
CPNE3-205ENST00000522240 A0A1W2PP11 408 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 A1L4Q6 167 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 CDIPTO14735 213 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 AKR7A2O43488 359 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 RHBDL1O75783 438 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 HTR3BO95264 441 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 SFTPBP07988 381 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 FGF12P61328 243 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 ERVK11-1P61568 191 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 ZNF846Q147U1 533 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 OR10K2Q6IF99 312 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 WDR82Q6UXN9 313 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 LINC00596Q86U02 117 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 C11orf53Q8IXP5 236 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 OR4M1Q8NGD0 313 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 OR51T1Q8NGJ9 327 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 Q8TCH9 128 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 S100A16Q96FQ6 103 aaKnown RBP11.04□□□□□ -0.64
CPNE3-205ENST00000522240 SOSTQ9BQB4 213 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 NRIP2Q9BQI9 281 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 SAP30LQ9HAJ7 183 aa11.04□□□□□ -0.64
CPNE3-205ENST00000522240 TANC2Q9HCD6 1990 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 APCP25054 2843 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A10PA6NDY2 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A18PA6NE21 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A16PA6NEW6 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A20PA6NIJ5 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A8PA6NJQ4 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A7PA6NKC0 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A22PA8MWA6 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A12PA8MX19 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A5PA8MXJ8 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A23PA8MXZ1 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 IFNL4K9M1U5 179 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 XRCC3O43542 346 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 CHRM2P08172 466 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A15PP0C7V4 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A13PP0C7W8 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A14PP0C7W9 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM90A24PP0C7X0 464 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 BCL3P20749 454 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 CDK2P24941 298 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 NPBWR2P48146 333 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 RBM11P57052 281 aaKnown RBP11.03□□□□□ -0.64
CPNE3-205ENST00000522240 IL13RA2Q14627 380 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 MPPED2Q15777 294 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 ZNF181Q2M3W8 571 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 SP5Q6BEB4 398 aaPredicted RBP11.03□□□□□ -0.64
CPNE3-205ENST00000522240 C20orf204Q6ZNR8 217 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 BIVMQ86UB2 503 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 FAM89BQ8N5H3 189 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 OR56B1Q8NGI3 324 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 C15orf40Q8WUR7 153 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 PHF21AQ96BD5 680 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 SELENOIQ9C0D9 397 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 ATG5Q9H1Y0 275 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 BANF2Q9H503 90 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 UBTD1Q9HAC8 227 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 HES4Q9HCC6 221 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 DIABLOQ9NR28 239 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 UFSP2Q9NUQ7 469 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 C1orf123Q9NWV4 160 aa11.03□□□□□ -0.64
CPNE3-205ENST00000522240 ARFGEF3Q5TH69 2177 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 hCG_1807616A0A1W2PRN6 198 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 FABP12A6NFH5 140 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 SRRM5B3KS81 715 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 H7C417 338 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 RAB27BO00194 218 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 CD8AP01732 235 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 SOD3P08294 240 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 VAMP1P23763 118 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 CD40LGP29965 261 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 MPV17LQ2QL34 196 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 TMEM69Q5SWH9 247 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 PYHIN1Q6K0P9 492 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 FIP1L1Q6UN15 594 aaKnown RBP11.02□□□□□ -0.65
CPNE3-205ENST00000522240 FAM131AQ6UXB0 335 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 MOGAT3Q86VF5 341 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 FAM58AQ8N1B3 248 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 OR11L1Q8NGX0 322 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 EMG1Q92979 244 aaKnown RBP11.02□□□□□ -0.65
CPNE3-205ENST00000522240 C14orf79Q96F83 325 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 CLEC4MQ9H2X3 399 aaPredicted RBP11.02□□□□□ -0.65
CPNE3-205ENST00000522240 GCM1Q9NP62 436 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 DECR2Q9NUI1 292 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 RBFOX1Q9NWB1 397 aaKnown RBP11.02□□□□□ -0.65
CPNE3-205ENST00000522240 RASL12Q9NYN1 266 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 ABCA4P78363 2273 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 ROS1P08922 2347 aa11.02□□□□□ -0.65
CPNE3-205ENST00000522240 PKDREJQ9NTG1 2253 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 A0A0A6YYD4 124 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 IGHV3-64DA0A0J9YX35 117 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 FOXI3A8MTJ6 420 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms