RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 CROCCP3Q8IVE0 287 aa20.25■□□□□ 0.83
PVT1-212ENST00000521951 FAM58AQ8N1B3 248 aa20.25■□□□□ 0.83
PVT1-212ENST00000521951 OR51D1Q8NGF3 324 aa20.25■□□□□ 0.83
PVT1-212ENST00000521951 EMG1Q92979 244 aaKnown RBP20.25■□□□□ 0.83
PVT1-212ENST00000521951 FAM3DQ96BQ1 224 aa20.25■□□□□ 0.83
PVT1-212ENST00000521951 FOXC2Q99958 501 aa20.25■□□□□ 0.83
PVT1-212ENST00000521951 BARHL1Q9BZE3 327 aa20.25■□□□□ 0.83
PVT1-212ENST00000521951 KCNK15Q9H427 330 aa20.25■□□□□ 0.83
PVT1-212ENST00000521951 TMEM165Q9HC07 324 aa20.25■□□□□ 0.83
PVT1-212ENST00000521951 DNAJB11Q9UBS4 358 aa20.25■□□□□ 0.83
PVT1-212ENST00000521951 A0A0B4J203 849 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 A0A1W2PP11 408 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 NDUFS8O00217 210 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 CSTBP04080 98 aaKnown RBP20.24■□□□□ 0.83
PVT1-212ENST00000521951 ARSBP15848 533 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 PRKACAP17612 351 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 GPR176Q14439 515 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 SMIM21Q3B7S5 101 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 C2orf76Q3KRA6 126 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 Q5PR19 223 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 PRSS57Q6UWY2 283 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 KRTAP1-3Q8IUG1 177 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 LIN7BQ9HAP6 207 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 HMG20AQ9NP66 347 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 BATF3Q9NR55 127 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 PCDHB16Q9NRJ7 776 aa20.24■□□□□ 0.83
PVT1-212ENST00000521951 CCDC168Q8NDH2 2452 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 TRAV38-1A0A0B4J264 116 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 FSTL3O95633 263 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 VSIG8P0DPA2 414 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 MUC1P15941 1255 aaPredicted RBP20.23■□□□□ 0.83
PVT1-212ENST00000521951 RANBP1P43487 201 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 QRFPP83859 136 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 MICBQ29980 383 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 OR10K2Q6IF99 312 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 LRRC28Q86X40 367 aaPredicted RBP20.23■□□□□ 0.83
PVT1-212ENST00000521951 FAM90A1Q86YD7 464 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 OR5T2Q8NGG2 359 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 PIMREGQ9BSJ6 248 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 NLKQ9UBE8 527 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 IL36RNQ9UBH0 155 aa20.23■□□□□ 0.83
PVT1-212ENST00000521951 PRRC2AP48634 2157 aaKnown RBP20.23■□□□□ 0.83
PVT1-212ENST00000521951 IGHV4-30-2A0A087WSY4 118 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 MDH2P40926 338 aaKnown RBP20.22■□□□□ 0.83
PVT1-212ENST00000521951 RORCP51449 518 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 BMXP51813 675 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 FGF12P61328 243 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 TMEM104Q8NE00 496 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 DYNC2LI1Q8TCX1 351 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 BPESC1Q9GZL8 116 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 BANF2Q9H503 90 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 TMEM14DPA8MWL7 114 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 VWC2LB2RUY7 222 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 CRTAPO75718 401 aaPredicted RBP20.22■□□□□ 0.83
PVT1-212ENST00000521951 ART1P52961 327 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 SNU13P55769 128 aaKnown RBP20.22■□□□□ 0.83
PVT1-212ENST00000521951 ZNF404Q494X3 552 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 SHEQ5VZ18 495 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 OSR2Q8N2R0 312 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 OR51T1Q8NGJ9 327 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 FAM46BQ96A09 425 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 TMEM246Q9BRR3 403 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 CST11Q9H112 138 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 OR5V1Q9UGF6 321 aa20.22■□□□□ 0.83
PVT1-212ENST00000521951 CSMD1Q96PZ7 3565 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 ISPDA4D126 451 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 OR2AT4A6NND4 320 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 LDLRAD4O15165 306 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 TMEM127O75204 238 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 KNG1P01042 644 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 PSG2P11465 335 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 GTF2F2P13984 249 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 SNRPBP14678 240 aaKnown RBP20.21■□□□□ 0.83
PVT1-212ENST00000521951 NR4A2P43354 598 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 UNC119Q13432 240 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 OR2W3Q7Z3T1 314 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 KCNG3Q8TAE7 436 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 FBLN5Q9UBX5 448 aa20.21■□□□□ 0.83
PVT1-212ENST00000521951 TMEM272A0A1B0GTI8 110 aa20.2■□□□□ 0.82
PVT1-212ENST00000521951 RFPL4AA6NLU0 287 aa20.2■□□□□ 0.82
PVT1-212ENST00000521951 RFPL4AL1F8VTS6 287 aa20.2■□□□□ 0.82
PVT1-212ENST00000521951 TNFRSF13BO14836 293 aaPredicted RBP20.2■□□□□ 0.82
PVT1-212ENST00000521951 MPIG6BO95866 241 aa20.2■□□□□ 0.82
PVT1-212ENST00000521951 PAHP00439 452 aa20.2■□□□□ 0.82
PVT1-212ENST00000521951 GYPAP02724 150 aa20.2■□□□□ 0.82
PVT1-212ENST00000521951 MGMTP16455 207 aa20.2■□□□□ 0.82
PVT1-212ENST00000521951 DUSP1P28562 367 aa20.2■□□□□ 0.82
PVT1-212ENST00000521951 CAPZA1P52907 286 aa20.2■□□□□ 0.82
PVT1-212ENST00000521951 STUMQ69YW2 141 aa20.2■□□□□ 0.82
PVT1-212ENST00000521951 FIP1L1Q6UN15 594 aaKnown RBP20.2■□□□□ 0.82
PVT1-212ENST00000521951 MUC20Q8N307 709 aaPredicted RBP20.2■□□□□ 0.82
PVT1-212ENST00000521951 ANGPTL6Q8NI99 470 aa20.2■□□□□ 0.82
PVT1-212ENST00000521951 MRPS24Q96EL2 167 aaKnown RBP20.2■□□□□ 0.82
PVT1-212ENST00000521951 OR14J1Q9UGF5 321 aa20.2■□□□□ 0.82
PVT1-212ENST00000521951 IGKV1D-17A0A075B6S4 117 aa20.19■□□□□ 0.82
PVT1-212ENST00000521951 TFF1P04155 84 aa20.19■□□□□ 0.82
PVT1-212ENST00000521951 ZNF182P17025 639 aaPredicted RBP20.19■□□□□ 0.82
PVT1-212ENST00000521951 PLA2G7Q13093 441 aa20.19■□□□□ 0.82
PVT1-212ENST00000521951 ZNF146Q15072 292 aa20.19■□□□□ 0.82
PVT1-212ENST00000521951 PIGYQ3MUY2 71 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms