RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 SLC36A3Q495N2 470 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 TPTE2P1Q5T6R2 138 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 ACSM6Q6P461 480 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 DPY19L2P2Q6ZN68 376 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 DCXRQ7Z4W1 244 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 THNSL2Q86YJ6 484 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 RNF113BQ8IZP6 322 aaKnown RBP6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 ABHD12Q8N2K0 398 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 CSNK2A3Q8NEV1 391 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 OR10A6Q8NH74 314 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 PRRC1Q96M27 445 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 ZNF714Q96N38 554 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 COPS4Q9BT78 406 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 JAM3Q9BX67 310 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 RASL12Q9NYN1 266 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 CCDC167Q9P0B6 97 aa6.8□□□□□ -1.32
TRAPPC9-212ENST00000521944 TVP23AA6NH52 213 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 LEUTXA8MZ59 168 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 ZNF732B4DXR9 585 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 C12orf77C9JDV5 145 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 BUB1B-PAK6H3BSN5 160 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 GSTA4O15217 222 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 HLA-DQA2P01906 255 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 FAM106CPP0CH98 169 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 TROVE2P10155 538 aaKnown RBP eCLIP6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 HIST1H1CP16403 213 aaKnown RBP6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 GPR12P47775 334 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 SLC7A2P52569 658 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 RUNX1Q01196 453 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 EWSR1Q01844 656 aaKnown RBP eCLIP6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 ZNF616Q08AN1 781 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 HNF4GQ14541 408 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 TIGD6Q17RP2 521 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 NANOGP8Q6NSW7 305 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 HAGHLQ6PII5 290 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 DNM1P34Q6PK57 102 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 KRT74Q7RTS7 529 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 OFCC1Q8IZS5 231 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 BATF2Q8N1L9 274 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 TPRX1Q8N7U7 411 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 EIF1ADQ8N9N8 165 aaKnown RBP6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 POC1AQ8NBT0 407 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 OR4K13Q8NH42 304 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 RASSF5Q8WWW0 418 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 PIGCQ92535 297 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 SLAMF6Q96DU3 332 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 CGREF1Q99674 301 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 NRIP2Q9BQI9 281 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 THAP7Q9BT49 309 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 HES4Q9HCC6 221 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 CENPMQ9NSP4 180 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 BAG5Q9UL15 447 aa6.79□□□□□ -1.32
TRAPPC9-212ENST00000521944 FAM172BPA6NC97 362 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 ARRDC5A6NEK1 342 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 FGF16O43320 207 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 DNAJC8O75937 253 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 ANXA2P07355 339 aaKnown RBP6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 PYCR1P32322 319 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 OMPP47874 163 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 CX3CR1P49238 355 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 SLURP1P55000 103 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 EDDM3BP56851 147 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 ZNF121P58317 390 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 ESRRGP62508 458 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 GABPB1Q06547 395 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 EIF2B1Q14232 305 aaKnown RBP6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 DIAPH2-AS1Q14236 149 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 TRAM2Q15035 370 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 GFOD2Q3B7J2 385 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 SMIM21Q3B7S5 101 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 CEP78Q5JTW2 689 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 ZNF730Q6ZMV8 503 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 FAM57BQ71RH2 274 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 FOXRED2Q8IWF2 684 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 SGPP2Q8IWX5 399 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 OR6Q1Q8NGQ2 317 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 OR56B4Q8NH76 319 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 ZNF671Q8TAW3 534 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 ARPC1AQ92747 370 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 ITFG2Q969R8 447 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 ERMAPQ96PL5 475 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 OR5B12Q96R08 314 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 NSRP1Q9H0G5 558 aaKnown RBP6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 ALX4Q9H161 411 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 ZNF286AQ9HBT8 521 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 KRCC1Q9NPI7 259 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 THAP1Q9NVV9 213 aa6.78□□□□□ -1.32
TRAPPC9-212ENST00000521944 SRRM2Q9UQ35 2752 aaKnown RBP6.77□□□□□ -1.33
TRAPPC9-212ENST00000521944 F8VVB4 439 aa6.77□□□□□ -1.33
TRAPPC9-212ENST00000521944 F8VWA3 439 aa6.77□□□□□ -1.33
TRAPPC9-212ENST00000521944 AP4M1O00189 453 aa6.77□□□□□ -1.33
TRAPPC9-212ENST00000521944 HSPA12AO43301 675 aa6.77□□□□□ -1.33
TRAPPC9-212ENST00000521944 NOS1APO75052 506 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC9-212ENST00000521944 ARSBP15848 533 aa6.77□□□□□ -1.33
TRAPPC9-212ENST00000521944 RPS6KA3P51812 740 aa6.77□□□□□ -1.33
TRAPPC9-212ENST00000521944 ERVK11-1P61568 191 aa6.77□□□□□ -1.33
TRAPPC9-212ENST00000521944 GNG3P63215 75 aa6.77□□□□□ -1.33
TRAPPC9-212ENST00000521944 MEF2CQ06413 473 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC9-212ENST00000521944 HLA-DRB5Q30154 266 aa6.77□□□□□ -1.33
TRAPPC9-212ENST00000521944 CEACAM21Q3KPI0 293 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms