RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 OR14K1Q8NGZ2 314 aa11.96□□□□□ -0.49
PRKDC-204ENST00000521331 NSL1Q96IY1 281 aa11.96□□□□□ -0.49
PRKDC-204ENST00000521331 MNTQ99583 582 aa11.96□□□□□ -0.49
PRKDC-204ENST00000521331 OCSTAMPQ9BR26 566 aa11.96□□□□□ -0.49
PRKDC-204ENST00000521331 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.96□□□□□ -0.49
PRKDC-204ENST00000521331 TVP23BQ9NYZ1 205 aa11.96□□□□□ -0.49
PRKDC-204ENST00000521331 SLC7A11Q9UPY5 501 aa11.96□□□□□ -0.49
PRKDC-204ENST00000521331 R4GMQ9 66 aa11.96□□□□□ -0.49
PRKDC-204ENST00000521331 A0A1W2PRX2 142 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 hADV38S2A0JD32 116 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 DNAJC8O75937 253 aaPredicted RBP11.95□□□□□ -0.5
PRKDC-204ENST00000521331 MPIG6BO95866 241 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 ACTA2P62736 377 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 ACTG2P63267 376 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 ACTC1P68032 377 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 ACTA1P68133 377 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 TMEM95Q3KNT9 176 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 ZNF322Q6U7Q0 402 aaPredicted RBP11.95□□□□□ -0.5
PRKDC-204ENST00000521331 Q6ZS46 218 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 ZBTB49Q6ZSB9 765 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 Q6ZSR3 168 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 C16orf82Q7Z2V1 217 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 ANGPTL5Q86XS5 388 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 NDNFQ8TB73 568 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 DNAJC9Q8WXX5 260 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 CCDC124Q96CT7 223 aaKnown RBP11.95□□□□□ -0.5
PRKDC-204ENST00000521331 AKR1E2Q96JD6 320 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 SNX22Q96L94 193 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 CEP19Q96LK0 163 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 TTTY10Q9BZA0 68 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 OR52A1Q9UKL2 312 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 HILPDAQ9Y5L2 63 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 SNX5Q9Y5X3 404 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 SESN1Q9Y6P5 492 aa11.95□□□□□ -0.5
PRKDC-204ENST00000521331 IGHV2-26A0A0B4J1V2 119 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 A0A1B0GTI1 187 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 AQP12BA6NM10 295 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 FAM90A22PA8MWA6 464 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 PRKACGP22612 351 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 CXCR4P61073 352 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 GNGT1P63211 74 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 SLC35A2P78381 396 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 IL18R1Q13478 541 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 AQP12AQ8IXF9 295 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 HS3ST5Q8IZT8 346 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 ZNF676Q8N7Q3 588 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 BCAS4Q8TDM0 211 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 CANT1Q8WVQ1 401 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 PRRG3Q9BZD7 231 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 TSSC4Q9Y5U2 329 aaPredicted RBP11.94□□□□□ -0.5
PRKDC-204ENST00000521331 LINC00312Q9Y6C7 94 aa11.94□□□□□ -0.5
PRKDC-204ENST00000521331 FAM230AA0A1W2PPH8 454 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 MEX3AA1L020 520 aaKnown RBP11.93□□□□□ -0.5
PRKDC-204ENST00000521331 A6NIN4 97 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 DUS4LO95620 317 aaKnown RBP11.93□□□□□ -0.5
PRKDC-204ENST00000521331 PF4P02776 101 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 CCL1P22362 96 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 CALB2P22676 271 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 CRISP1P54107 249 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 SLX4IPQ5VYV7 408 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 TCF23Q7RTU1 214 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 CENPVQ7Z7K6 275 aaPredicted RBP11.93□□□□□ -0.5
PRKDC-204ENST00000521331 SLC35F2Q8IXU6 374 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 TRMT10AQ8TBZ6 339 aaKnown RBP11.93□□□□□ -0.5
PRKDC-204ENST00000521331 CAPSLQ8WWF8 208 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 RCC1LQ96I51 464 aaKnown RBP11.93□□□□□ -0.5
PRKDC-204ENST00000521331 APOL4Q9BPW4 351 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 CLEC7AQ9BXN2 247 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 TMEM133Q9H2Q1 129 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 LIN7BQ9HAP6 207 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 PLEKHA1Q9HB21 404 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 SEBOXQ9HB31 216 aaPredicted RBP11.93□□□□□ -0.5
PRKDC-204ENST00000521331 MTCH1Q9NZJ7 389 aa11.93□□□□□ -0.5
PRKDC-204ENST00000521331 TCRBV4S1A1TA0A5B7 111 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 TMEM82A0PJX8 343 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 ZNF670-ZNF695F2Z2N8 137 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 K7EIL1 84 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 GATBO75879 557 aaKnown RBP11.92□□□□□ -0.5
PRKDC-204ENST00000521331 CLIC3O95833 236 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 JUNBP17275 347 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-204ENST00000521331 HTR1DP28221 377 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 PEX2P28328 305 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 ARHGDIBP52566 201 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 EDDM3AQ14507 147 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 MEPCEQ7L2J0 689 aaKnown RBP11.92□□□□□ -0.5
PRKDC-204ENST00000521331 Q8IYB0 196 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 ENTHD1Q8IYW4 607 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 OR4X2Q8NGF9 303 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 SLAMF9Q96A28 289 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 CADM1Q9BY67 442 aaKnown RBP11.92□□□□□ -0.5
PRKDC-204ENST00000521331 PAPOLBQ9NRJ5 636 aaKnown RBP11.92□□□□□ -0.5
PRKDC-204ENST00000521331 CLN6Q9NWW5 311 aa11.92□□□□□ -0.5
PRKDC-204ENST00000521331 H2AFY2Q9P0M6 372 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-204ENST00000521331 MRM2Q9UI43 246 aaKnown RBP11.92□□□□□ -0.5
PRKDC-204ENST00000521331 F8VVB4 439 aa11.91□□□□□ -0.5
PRKDC-204ENST00000521331 F8VWA3 439 aa11.91□□□□□ -0.5
PRKDC-204ENST00000521331 MAGEB4O15481 346 aaPredicted RBP11.91□□□□□ -0.5
PRKDC-204ENST00000521331 PRKYO43930 277 aa11.91□□□□□ -0.5
PRKDC-204ENST00000521331 FAM107AO95990 144 aa11.91□□□□□ -0.5
PRKDC-204ENST00000521331 HAND1O96004 215 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms