RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 TRAP1Q12931 704 aaKnown RBP4.72□□□□□ -1.65
PABPC1-216ENST00000520868 CDONQ4KMG0 1287 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 IFI44LQ53G44 452 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 GPR139Q6DWJ6 353 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 DNM1P34Q6PK57 102 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 DUX4L9Q6RFH8 374 aaPredicted RBP4.72□□□□□ -1.65
PABPC1-216ENST00000520868 CFAP77Q6ZQR2 320 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 TSEN54Q7Z6J9 526 aaKnown RBP4.72□□□□□ -1.65
PABPC1-216ENST00000520868 OR6V1Q8N148 313 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 PNKDQ8N490 385 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 GCSAMQ8N6F7 178 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 OR2AJ1Q8NGZ0 328 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 OR2AE1Q8NHA4 323 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 SLC7A13Q8TCU3 470 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 RSRC1Q96IZ7 334 aaKnown RBP4.72□□□□□ -1.65
PABPC1-216ENST00000520868 ATP6V1G3Q96LB4 118 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 ERMAPQ96PL5 475 aaPredicted RBP4.72□□□□□ -1.65
PABPC1-216ENST00000520868 CCL13Q99616 98 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 ADAT1Q9BUB4 502 aaKnown RBP4.72□□□□□ -1.65
PABPC1-216ENST00000520868 NDEL1Q9GZM8 345 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 NSRP1Q9H0G5 558 aaKnown RBP4.72□□□□□ -1.65
PABPC1-216ENST00000520868 CSTL1Q9H114 145 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 PPA2Q9H2U2 334 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 INTS9Q9NV88 658 aaKnown RBP4.72□□□□□ -1.65
PABPC1-216ENST00000520868 GID8Q9NWU2 228 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 CMTM6Q9NX76 183 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 ADA2Q9NZK5 511 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 DUX4Q9UBX2 424 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 VPREB3Q9UKI3 123 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 AURKCQ9UQB9 309 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 SIGLEC7Q9Y286 467 aa4.72□□□□□ -1.65
PABPC1-216ENST00000520868 IGLV1-36A0A0B4J1U3 117 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 A0A1B0GVI7 797 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 MEIOCA2RUB1 952 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 M0R135 149 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 CXCR6O00574 342 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 PIN1P1O15428 100 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 GMDSO60547 372 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 EDF1O60869 148 aaKnown RBP4.71□□□□□ -1.66
PABPC1-216ENST00000520868 RENP00797 406 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 SERPINA1P01009 418 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 NPPAP01160 153 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 TROVE2P10155 538 aaKnown RBP eCLIP4.71□□□□□ -1.66
PABPC1-216ENST00000520868 EEF1B2P24534 225 aaKnown RBP4.71□□□□□ -1.66
PABPC1-216ENST00000520868 TGFBR2P37173 567 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 RPS27P42677 84 aaKnown RBP4.71□□□□□ -1.66
PABPC1-216ENST00000520868 FXYD6P3P58550 94 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 GMFBP60983 142 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 ZNF92Q03936 586 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 ECH1Q13011 328 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 KLRD1Q13241 179 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 HERPUD1Q15011 391 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 LY6EQ16553 131 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 RFX4Q33E94 735 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 SNAI3Q3KNW1 292 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 SLC36A3Q495N2 470 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 FGD3Q5JSP0 725 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 C6orf141Q5SZD1 244 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 METTL21CQ5VZV1 264 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 SMARCD3Q6STE5 483 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 DPY19L2P2Q6ZN68 376 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 C1orf122Q6ZSJ8 110 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 ADCK1Q86TW2 530 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 CYP4Z1Q86W10 505 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 LYG1Q8N1E2 194 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 SLC26A10Q8NG04 563 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 OR4K13Q8NH42 304 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 MRAPQ8TCY5 172 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 SPTSSAQ969W0 71 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 SEH1LQ96EE3 360 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 ZNF799Q96GE5 643 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 GPX7Q96SL4 187 aaPredicted RBP4.71□□□□□ -1.66
PABPC1-216ENST00000520868 NMNAT3Q96T66 252 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 ATF6BQ99941 703 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 SLC22A4Q9H015 551 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 FN3KQ9H479 309 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 RPRD1BQ9NQG5 326 aaKnown RBP4.71□□□□□ -1.66
PABPC1-216ENST00000520868 ZNRD1Q9P1U0 126 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 RPUSD1Q9UJJ7 312 aaKnown RBP4.71□□□□□ -1.66
PABPC1-216ENST00000520868 FOXJ3Q9UPW0 622 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 TMEM5Q9Y2B1 443 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 CAB39Q9Y376 341 aaPredicted RBP4.71□□□□□ -1.66
PABPC1-216ENST00000520868 NOP16Q9Y3C1 178 aaKnown RBP4.71□□□□□ -1.66
PABPC1-216ENST00000520868 KPTNQ9Y664 436 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 ENPP4Q9Y6X5 453 aa4.71□□□□□ -1.66
PABPC1-216ENST00000520868 TRBV4-1A0A0J9YWV2 114 aa4.7□□□□□ -1.66
PABPC1-216ENST00000520868 TVP23AA6NH52 213 aa4.7□□□□□ -1.66
PABPC1-216ENST00000520868 BBIP1A8MTZ0 92 aa4.7□□□□□ -1.66
PABPC1-216ENST00000520868 RNASEK-C17orf49H0YIS7 233 aa4.7□□□□□ -1.66
PABPC1-216ENST00000520868 BHLHE40O14503 412 aa4.7□□□□□ -1.66
PABPC1-216ENST00000520868 NPFFO15130 113 aa4.7□□□□□ -1.66
PABPC1-216ENST00000520868 NDUFB3O43676 98 aa4.7□□□□□ -1.66
PABPC1-216ENST00000520868 DIRAS1O95057 198 aa4.7□□□□□ -1.66
PABPC1-216ENST00000520868 PTBP3O95758 552 aaKnown RBP4.7□□□□□ -1.66
PABPC1-216ENST00000520868 TXNDC12O95881 172 aa4.7□□□□□ -1.66
PABPC1-216ENST00000520868 PAHP00439 452 aa4.7□□□□□ -1.66
PABPC1-216ENST00000520868 LHBP01229 141 aa4.7□□□□□ -1.66
PABPC1-216ENST00000520868 OPN1MWP04001 364 aa4.7□□□□□ -1.66
PABPC1-216ENST00000520868 H1F0P07305 194 aaKnown RBP4.7□□□□□ -1.66
PABPC1-216ENST00000520868 OPN1MW2P0DN77 364 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms