RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 PRF1P14222 555 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 PDZK1IP1Q13113 114 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 FAM166AQ6J272 317 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 BIVMQ86UB2 503 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 TRAF4Q9BUZ4 470 aaPredicted RBP8.84□□□□□ -0.99
MCF2-209ENST00000520602 GLS2Q9UI32 602 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 STARD10Q9Y365 291 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 C19orf67A6NJJ6 358 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 PDCD6O75340 191 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 H3F3AP84243 136 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 KCNMB1Q16558 191 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 CXorf67Q86X51 503 aaPredicted RBP8.84□□□□□ -0.99
MCF2-209ENST00000520602 SPAG16Q8N0X2 631 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 LGI3Q8N145 548 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 HSD17B11Q8NBQ5 300 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 SLC30A7Q8NEW0 376 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 OR1S1Q8NH92 325 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 LYZL4Q96KX0 146 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 EIF5A2Q9GZV4 153 aaKnown RBP8.84□□□□□ -0.99
MCF2-209ENST00000520602 ZNF629Q9UEG4 869 aaPredicted RBP8.84□□□□□ -0.99
MCF2-209ENST00000520602 ZNF391Q9UJN7 358 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 CD300LBA8K4G0 201 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 BCL2L11O43521 198 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 OR2A4O95047 310 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 CAMLGP49069 296 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 NOVA1P51513 510 aaKnown RBP8.84□□□□□ -0.99
MCF2-209ENST00000520602 AKR1D1P51857 326 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 RBM39Q14498 530 aaKnown RBP8.84□□□□□ -0.99
MCF2-209ENST00000520602 CLINT1Q14677 625 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 DPPA2Q7Z7J5 298 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 HOGA1Q86XE5 327 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 ZNF573Q86YE8 665 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 OR2A7Q96R45 310 aa8.84□□□□□ -0.99
MCF2-209ENST00000520602 LRRC3CA6NJW4 275 aa8.83□□□□□ -1
MCF2-209ENST00000520602 CD74P04233 296 aa8.83□□□□□ -1
MCF2-209ENST00000520602 ZBTB25P24278 435 aa8.83□□□□□ -1
MCF2-209ENST00000520602 ECI1P42126 302 aa8.83□□□□□ -1
MCF2-209ENST00000520602 P2RY4P51582 365 aa8.83□□□□□ -1
MCF2-209ENST00000520602 TMEM268Q5VZI3 342 aa8.83□□□□□ -1
MCF2-209ENST00000520602 OR13G1Q8NGZ3 307 aa8.83□□□□□ -1
MCF2-209ENST00000520602 C10orf35Q96D05 121 aa8.83□□□□□ -1
MCF2-209ENST00000520602 PRSS50Q9UI38 385 aa8.83□□□□□ -1
MCF2-209ENST00000520602 SSX5O60225 188 aa8.83□□□□□ -1
MCF2-209ENST00000520602 CYTIPO60759 359 aa8.83□□□□□ -1
MCF2-209ENST00000520602 NGFP01138 241 aa8.83□□□□□ -1
MCF2-209ENST00000520602 TSC22D1Q15714 1073 aa8.83□□□□□ -1
MCF2-209ENST00000520602 BAP18Q8IXM2 172 aa8.83□□□□□ -1
MCF2-209ENST00000520602 OR1J1Q8NGS3 322 aa8.83□□□□□ -1
MCF2-209ENST00000520602 FGFBP3Q8TAT2 258 aa8.83□□□□□ -1
MCF2-209ENST00000520602 ZNF488Q96MN9 340 aa8.83□□□□□ -1
MCF2-209ENST00000520602 SPIN2AQ99865 258 aa8.83□□□□□ -1
MCF2-209ENST00000520602 SPIN2BQ9BPZ2 258 aa8.83□□□□□ -1
MCF2-209ENST00000520602 FZR1Q9UM11 496 aa8.83□□□□□ -1
MCF2-209ENST00000520602 SRSF10O75494 262 aaKnown RBP8.83□□□□□ -1
MCF2-209ENST00000520602 TSPAN15O95858 294 aa8.83□□□□□ -1
MCF2-209ENST00000520602 CRHP06850 196 aa8.83□□□□□ -1
MCF2-209ENST00000520602 ZNF883P0CG24 379 aa8.83□□□□□ -1
MCF2-209ENST00000520602 CD59P13987 128 aa8.83□□□□□ -1
MCF2-209ENST00000520602 IL2RGP31785 369 aa8.83□□□□□ -1
MCF2-209ENST00000520602 AADACL3Q5VUY0 350 aa8.83□□□□□ -1
MCF2-209ENST00000520602 ZADH2Q8N4Q0 377 aa8.83□□□□□ -1
MCF2-209ENST00000520602 TMEM217Q8N7C4 229 aa8.83□□□□□ -1
MCF2-209ENST00000520602 RNF141Q8WVD5 230 aa8.83□□□□□ -1
MCF2-209ENST00000520602 LOXL4Q96JB6 756 aa8.83□□□□□ -1
MCF2-209ENST00000520602 SULT4A1Q9BR01 284 aa8.83□□□□□ -1
MCF2-209ENST00000520602 DNAJB11Q9UBS4 358 aa8.83□□□□□ -1
MCF2-209ENST00000520602 NUP50Q9UKX7 468 aa8.83□□□□□ -1
MCF2-209ENST00000520602 DHRS7CA6NNS2 312 aa8.82□□□□□ -1
MCF2-209ENST00000520602 M0R036 132 aa8.82□□□□□ -1
MCF2-209ENST00000520602 OR5AC1P0C628 307 aa8.82□□□□□ -1
MCF2-209ENST00000520602 BCL3P20749 454 aa8.82□□□□□ -1
MCF2-209ENST00000520602 RPL12P30050 165 aaKnown RBP8.82□□□□□ -1
MCF2-209ENST00000520602 SELENOVP59797 346 aa8.82□□□□□ -1
MCF2-209ENST00000520602 OR8G1Q15617 311 aa8.82□□□□□ -1
MCF2-209ENST00000520602 RIPPLY2Q5TAB7 128 aa8.82□□□□□ -1
MCF2-209ENST00000520602 NUFIP2Q7Z417 695 aaKnown RBP8.82□□□□□ -1
MCF2-209ENST00000520602 SARAFQ96BY9 339 aa8.82□□□□□ -1
MCF2-209ENST00000520602 RTL8AQ9BWD3 113 aa8.82□□□□□ -1
MCF2-209ENST00000520602 MAGT1Q9H0U3 335 aa8.82□□□□□ -1
MCF2-209ENST00000520602 TMEM231Q9H6L2 316 aa8.82□□□□□ -1
MCF2-209ENST00000520602 ZNF703Q9H7S9 590 aaPredicted RBP8.82□□□□□ -1
MCF2-209ENST00000520602 TMEM131Q92545 1883 aa8.82□□□□□ -1
MCF2-209ENST00000520602 POLEQ07864 2286 aa8.82□□□□□ -1
MCF2-209ENST00000520602 TRAV39A0A0B4J263 110 aa8.82□□□□□ -1
MCF2-209ENST00000520602 KIR2DS1A0A191URI9 304 aa8.82□□□□□ -1
MCF2-209ENST00000520602 LOC390937A0A1W2PQ73 354 aa8.82□□□□□ -1
MCF2-209ENST00000520602 KRBOX1C9JBD0 128 aa8.82□□□□□ -1
MCF2-209ENST00000520602 E9PLN8 166 aa8.82□□□□□ -1
MCF2-209ENST00000520602 MFNGO00587 321 aa8.82□□□□□ -1
MCF2-209ENST00000520602 M6PRP20645 277 aa8.82□□□□□ -1
MCF2-209ENST00000520602 KIR2DS4P43632 304 aa8.82□□□□□ -1
MCF2-209ENST00000520602 FAM3AP98173 230 aa8.82□□□□□ -1
MCF2-209ENST00000520602 KIR2DS1Q14954 304 aa8.82□□□□□ -1
MCF2-209ENST00000520602 FAHD2BQ6P2I3 314 aaPredicted RBP8.82□□□□□ -1
MCF2-209ENST00000520602 CLEC9AQ6UXN8 241 aa8.82□□□□□ -1
MCF2-209ENST00000520602 C17orf78Q8N4C9 275 aa8.82□□□□□ -1
MCF2-209ENST00000520602 OR10J5Q8NHC4 309 aa8.82□□□□□ -1
MCF2-209ENST00000520602 CD300LFQ8TDQ1 290 aa8.82□□□□□ -1
MCF2-209ENST00000520602 FAHD2AQ96GK7 314 aa8.82□□□□□ -1
MCF2-209ENST00000520602 PROK2Q9HC23 129 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms