RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 MAML2Q8IZL2 1156 aaPredicted RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 GPR137CQ8N3F9 429 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 PNLDC1Q8NA58 520 aaKnown RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 CHST4Q8NCG5 386 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 ADAD2Q8NCV1 583 aaKnown RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 Q8NFD4 153 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 PXT1Q8NFP0 134 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 COQ8AQ8NI60 647 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 CPT1CQ8TCG5 803 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 SFT2D1Q8WV19 159 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 TCTEX1D2Q8WW35 142 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 TMEM45BQ96B21 275 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 MRPS24Q96EL2 167 aaKnown RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 CPNE2Q96FN4 548 aaPredicted RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 PGAM5Q96HS1 289 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 ARHGAP5-AS1Q96IT6 56 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 LINC00052Q96N35 136 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 TECTBQ96PL2 329 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 AQP10Q96PS8 301 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 NKX3-1Q99801 234 aaPredicted RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 SSX3Q99909 188 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 VRK1Q99986 396 aaPredicted RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 RTBDNQ9BSG5 229 aaPredicted RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 RNF126Q9BV68 326 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 PAPOLGQ9BWT3 736 aaKnown RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 PECRQ9BY49 303 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 KRTAP3-1Q9BYR8 98 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 BCL2L14Q9BZR8 327 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 WDR13Q9H1Z4 485 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 RGCCQ9H4X1 137 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 AKIRIN1Q9H9L7 192 aaPredicted RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 SEC61A2Q9H9S3 476 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 ZMAT3Q9HA38 289 aaKnown RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 CYTL1Q9NRR1 136 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 MYEF2Q9P2K5 600 aaKnown RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 FBXO4Q9UKT5 387 aa4.39□□□□□ -1.71
SDC2-204ENST00000519914 CHTOPQ9Y3Y2 248 aaKnown RBP4.39□□□□□ -1.71
SDC2-204ENST00000519914 KMT2EQ8IZD2 1858 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 DOCK10Q96BY6 2186 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 ZNF716A6NP11 495 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 NPIPA2E9PIF3 369 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 NPIPA3F8WFD2 350 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 H0YIZ8 118 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 M0R135 149 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 NDUFS8O00217 210 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 SMAD9O15198 467 aaKnown RBP4.38□□□□□ -1.71
SDC2-204ENST00000519914 NUPL2O15504 423 aaKnown RBP4.38□□□□□ -1.71
SDC2-204ENST00000519914 SYNGR3O43761 229 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 SCO1O75880 301 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 CER1O95813 267 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 IGHV2-70P01814 119 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 PMP2P02689 132 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 HPNP05981 417 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 HEXAP06865 529 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 CTSDP07339 412 aaPredicted RBP4.38□□□□□ -1.71
SDC2-204ENST00000519914 DCNP07585 359 aaKnown RBP4.38□□□□□ -1.71
SDC2-204ENST00000519914 HCKP08631 526 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 FOLR2P14207 255 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 KLK2P20151 261 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 CNR1P21554 472 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 ACP1P24666 158 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 SFTPDP35247 375 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 SERPINF1P36955 418 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 GUCA1AP43080 201 aaPredicted RBP4.38□□□□□ -1.71
SDC2-204ENST00000519914 SNTB1Q13884 538 aaKnown RBP4.38□□□□□ -1.71
SDC2-204ENST00000519914 SRSF7Q16629 238 aaKnown RBP eCLIP4.38□□□□□ -1.71
SDC2-204ENST00000519914 SLC22A6Q4U2R8 563 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 C10orf91Q5T1B1 145 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 AVPI1Q5T686 147 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 OR52W1Q6IF63 320 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 PRSS54Q6PEW0 395 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 CLEC18BQ6UXF7 455 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 C17orf107Q6ZR85 190 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 Q6ZS49 121 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 LHFPL2Q6ZUX7 228 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 RPS19BP1Q86WX3 136 aaKnown RBP4.38□□□□□ -1.71
SDC2-204ENST00000519914 SVBPQ8N300 66 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 LRTM2Q8N967 370 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 POC1AQ8NBT0 407 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 OR5AP2Q8NGF4 316 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 OR2I1PQ8NGU4 316 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 OR5H2Q8NGV7 314 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 OR13G1Q8NGZ3 307 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 THAP6Q8TBB0 222 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 MARCH1Q8TCQ1 289 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 SPTSSAQ969W0 71 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 SPSB4Q96A44 273 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 PIK3IP1Q96FE7 263 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 ZNF799Q96GE5 643 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 FAM71F1Q96KD3 344 aaPredicted RBP4.38□□□□□ -1.71
SDC2-204ENST00000519914 C2orf50Q96LR7 162 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 ZNF385AQ96PM9 386 aaKnown RBP4.38□□□□□ -1.71
SDC2-204ENST00000519914 ZPBPQ9BS86 351 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 SPRY4Q9C004 299 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 METTL9Q9H1A3 318 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 PIGMQ9H3S5 423 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 RNF122Q9H9V4 155 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 ZNF160Q9HCG1 818 aa4.38□□□□□ -1.71
SDC2-204ENST00000519914 CHMP1AQ9HD42 196 aaPredicted RBP4.38□□□□□ -1.71
SDC2-204ENST00000519914 TMEM38BQ9NVV0 291 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms