RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 C9orf62Q8N4C0 152 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 OR11H4Q8NGC9 324 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 OR2T35Q8NGX2 323 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 FAM57AQ8TBR7 257 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 HDHD3Q9BSH5 251 aaPredicted RBP12.81□□□□□ -0.36
VCAN-211ENST00000513984 OR2J1Q9GZK6 312 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 FN3KRPQ9HA64 309 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 ZNF701Q9NV72 531 aaPredicted RBP12.81□□□□□ -0.36
VCAN-211ENST00000513984 EDARQ9UNE0 448 aa12.81□□□□□ -0.36
VCAN-211ENST00000513984 PRSS44E7EML9 344 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 IL2RAP01589 272 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 IGLV1-44P01699 117 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 RAC2P15153 192 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 IL32P24001 234 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 DNASE1P24855 282 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 OR3A3P47888 321 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 UCP2P55851 309 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 RAP2BP61225 183 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 MPPED2Q15777 294 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 TBR1Q16650 682 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 OVCH2Q7RTZ1 564 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 TMEM17Q86X19 198 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 MAFIPQ8WZ33 124 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 SLAMF9Q96A28 289 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 CMSS1Q9BQ75 279 aaKnown RBP12.8□□□□□ -0.36
VCAN-211ENST00000513984 SLA2Q9H6Q3 261 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 MGAT4AQ9UM21 535 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 BOD1L1Q8NFC6 3051 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 LAMA5O15230 3695 aa12.8□□□□□ -0.36
VCAN-211ENST00000513984 RRP8O43159 456 aaKnown RBP12.79□□□□□ -0.36
VCAN-211ENST00000513984 HOXD4P09016 255 aaPredicted RBP12.79□□□□□ -0.36
VCAN-211ENST00000513984 ZNF35P13682 527 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 FUT3P21217 361 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 ZBTB25P24278 435 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 UBE2MP61081 183 aaKnown RBP12.79□□□□□ -0.36
VCAN-211ENST00000513984 TSPAN5P62079 268 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 C2orf68Q2NKX9 166 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 CHRFAM7AQ494W8 412 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 BHLHA15Q7RTS1 189 aaPredicted RBP12.79□□□□□ -0.36
VCAN-211ENST00000513984 ZNF573Q86YE8 665 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 RPRMLQ8N4K4 120 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 C12orf45Q8N5I9 185 aaPredicted RBP12.79□□□□□ -0.36
VCAN-211ENST00000513984 FAM169BQ8N8A8 192 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 ASCC1Q8N9N2 400 aaKnown RBP12.79□□□□□ -0.36
VCAN-211ENST00000513984 SLC25A40Q8TBP6 338 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 PKIBQ9C010 78 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 PPA2Q9H2U2 334 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 EHFQ9NZC4 300 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 MTCH1Q9NZJ7 389 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 AMDHD2Q9Y303 409 aa12.79□□□□□ -0.36
VCAN-211ENST00000513984 NOP16Q9Y3C1 178 aaKnown RBP12.79□□□□□ -0.36
VCAN-211ENST00000513984 IGKV1D-8A0A087WSZ0 117 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 OR5H1A6NKK0 313 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 IQCF6A8MYZ5 107 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 TRAPPC2LH3BP13 241 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 TPD52L2O43399 206 aaKnown RBP12.78□□□□□ -0.36
VCAN-211ENST00000513984 AGFG2O95081 481 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 FCGR3AP08637 254 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 CA6P23280 308 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 CEACAM8P31997 349 aaPredicted RBP12.78□□□□□ -0.36
VCAN-211ENST00000513984 TDGF1P3P51864 188 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 TAS2R31P59538 309 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 ERVS71-1P61550 626 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 IL24Q13007 206 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 LYG2Q86SG7 212 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 PEG10Q86TG7 708 aaKnown RBP12.78□□□□□ -0.36
VCAN-211ENST00000513984 OR1J1Q8NGS3 322 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 OR13G1Q8NGZ3 307 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 MARCH1Q8TCQ1 289 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 ASB13Q8WXK3 278 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 CCDC120Q96HB5 630 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 GON7Q9BXV9 100 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 CHIAQ9BZP6 476 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 GPR132Q9UNW8 380 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 OSGIN2Q9Y236 505 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 HSPB11Q9Y547 144 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 PTPRQQ9UMZ3 2332 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 GOSR2O14653 212 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 SYNGR1O43759 233 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 OR7C1O76099 320 aaPredicted RBP12.78□□□□□ -0.36
VCAN-211ENST00000513984 HLA-AP01891 365 aaKnown RBP12.78□□□□□ -0.36
VCAN-211ENST00000513984 CECR9P0C854 216 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 SELEP16581 610 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 TUBG1P23258 451 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 FPR2P25090 351 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 H2BFSP57053 126 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 PPP1R1AQ13522 171 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 GRK1Q15835 563 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 MPV17LQ2QL34 196 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 AADACL3Q5VUY0 350 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 HAGHLQ6PII5 290 aaPredicted RBP12.78□□□□□ -0.36
VCAN-211ENST00000513984 NCCRP1Q6ZVX7 275 aaPredicted RBP12.78□□□□□ -0.36
VCAN-211ENST00000513984 Q8NA96 180 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 EXTL1Q92935 676 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 SCGB3A2Q96PL1 93 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 SFXN3Q9BWM7 321 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 OR51I2Q9H344 312 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 TUBG2Q9NRH3 451 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 OPN4Q9UHM6 478 aa12.78□□□□□ -0.36
VCAN-211ENST00000513984 ANXA10Q9UJ72 324 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms