RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	9.81	□□□□□ -0.84
PDCD6-210	ENST00000513582	NSG2	Q9Y328	171 aa		9.81	□□□□□ -0.84
PDCD6-210	ENST00000513582	CFAP54	Q96N23	3096 aa		9.81	□□□□□ -0.84
PDCD6-210	ENST00000513582	DOCK7	Q96N67	2140 aa		9.81	□□□□□ -0.84
PDCD6-210	ENST00000513582	CTH	P32929	405 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	SPSB3	Q6PJ21	355 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	CBLN3	Q6UW01	205 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	CPEB2	Q7Z5Q1	589 aa	Known RBP	9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	ZNF573	Q86YE8	665 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	CCDC74B	Q96LY2	380 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	CCNL2	Q96S94	520 aa	Predicted RBP	9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	IGKV1D-42	A0A075B6H8	117 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	TNF	P01375	233 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	CD82	P27701	267 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	S100A7	P31151	101 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	TLE1	Q04724	770 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	PRSS8	Q16651	343 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	TMEM52B	Q4KMG9	183 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	C11orf42	Q8N5U0	333 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	ARV1	Q9H2C2	271 aa		9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	9.8	□□□□□ -0.84
PDCD6-210	ENST00000513582		A0A0A6YYD4	124 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	ZNF878	C9JN71	531 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	CHRM2	P08172	466 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	TNFSF10	P50591	281 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	SUCLG1	P53597	346 aa	Known RBP	9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	SNU13	P55769	128 aa	Known RBP	9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	UCP3	P55916	312 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	RAB38	P57729	211 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	NSDHL	Q15738	373 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	ZNF74	Q16587	644 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	C1orf100	Q5SVJ3	147 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	FHL5	Q5TD97	284 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	CATSPERD	Q86XM0	798 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	C22orf15	Q8WYQ4	148 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	TMEM18	Q96B42	140 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	RCC1L	Q96I51	464 aa	Known RBP	9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	ARHGAP5-AS1	Q96IT6	56 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	ABHD6	Q9BV23	337 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	VN1R1	Q9GZP7	353 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	CHST11	Q9NPF2	352 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	ZNF701	Q9NV72	531 aa	Predicted RBP	9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	FKBP11	Q9NYL4	201 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	GNG13	Q9P2W3	67 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	SLC7A11	Q9UPY5	501 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	PPIAL4A	Q9Y536	164 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	ZFP92	A6NM28	416 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	GPR137B	O60478	399 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	OR5AC1	P0C628	307 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	ZNF823	P16415	610 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	COL9A1	P20849	921 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	GABRR1	P24046	479 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	ATP6V0C	P27449	155 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	TSPO2	Q5TGU0	170 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582		Q6ZS52	159 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	SLC16A14	Q7RTX9	510 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	SLC35E3	Q7Z769	313 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	OR5D18	Q8NGL1	313 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	TSLP	Q969D9	159 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	SDSL	Q96GA7	329 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	FOXJ2	Q9P0K8	574 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	NSG1	A0A0A6YYJ2	146 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	FIGNL2	A6NMB9	653 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582		A8MVM7	634 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	TMEM150C	B9EJG8	249 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	CRYAB	P02511	175 aa	Known RBP	9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	BRS3	P32247	399 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	NOVA1	P51513	510 aa	Known RBP	9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	TAF9	Q16594	264 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	VAX1	Q5SQQ9	334 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	SULF2	Q8IWU5	870 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	MAML2	Q8IZL2	1156 aa	Predicted RBP	9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	KTI12	Q96EK9	354 aa	Predicted RBP	9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	EMC6	Q9BV81	110 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	LRFN1	Q9P244	771 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	MTCH2	Q9Y6C9	303 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	FREM3	P0C091	2139 aa		9.79	□□□□□ -0.84
PDCD6-210	ENST00000513582	TMEM210	A6NLX4	147 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	GPR89A	B7ZAQ6	455 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	HPRT1	P00492	218 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	GPR89B	P0CG08	455 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	CEACAM1	P13688	526 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	FST	P19883	344 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	BCKDHB	P21953	392 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	RBX1	P62877	108 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	GNB2	P62879	340 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	TLE4	Q04727	773 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	CLN3	Q13286	438 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	C1orf194	Q5T5A4	169 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	KCTD18	Q6PI47	426 aa	Predicted RBP	9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	GLIPR1L1	Q6UWM5	242 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	BATF2	Q8N1L9	274 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	EXTL1	Q92935	676 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	TOMM40L	Q969M1	308 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	KIR3DX1	Q9H7L2	352 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	HIF3A	Q9Y2N7	669 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	B3GALT1	Q9Y5Z6	326 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	THSD7B	Q9C0I4	1608 aa		9.78	□□□□□ -0.84
PDCD6-210	ENST00000513582	ESPL1	Q14674	2120 aa		9.78	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms