RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 RTL8AQ9BWD3 113 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 OR51I2Q9H344 312 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 IFT22Q9H7X7 185 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 ELL3Q9HB65 397 aaPredicted RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 PLEKHJ1Q9NW61 149 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 CRIM1Q9NZV1 1036 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 RCC2Q9P258 522 aaKnown RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 ZNF629Q9UEG4 869 aaPredicted RBP7.17□□□□□ -1.26
RNF4-220ENST00000513578 FREM2Q5SZK8 3169 aa7.17□□□□□ -1.26
RNF4-220ENST00000513578 PTPRQQ9UMZ3 2332 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 IGHV1-18A0A0C4DH31 117 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 TMEM82A0PJX8 343 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 UBE2QL1A1L167 161 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 LRP5LA4QPB2 252 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 TMEM210A6NLX4 147 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 A8MXE2 369 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 J3QT63 122 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 M0QYG6 137 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 PDCD6O75340 191 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 SNAPC5O75971 98 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 IFNA6P05013 189 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 FCER2P06734 321 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 CECR9P0C854 216 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 VSIG10L2P0DP72 767 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 ANXA3P12429 323 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 ANXA7P20073 488 aaKnown RBP7.16□□□□□ -1.26
RNF4-220ENST00000513578 FUT3P21217 361 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 HRH1P35367 487 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 ECI1P42126 302 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 PRSS12P56730 875 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 CXADRP78310 365 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 CD83Q01151 205 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 CBX3Q13185 183 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 IL13RA2Q14627 380 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 SURF2Q15527 256 aaPredicted RBP7.16□□□□□ -1.26
RNF4-220ENST00000513578 MPPED2Q15777 294 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 KCNJ8Q15842 424 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 TAF9Q16594 264 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 MICBQ29980 383 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 ATPAF1Q5TC12 328 aaPredicted RBP7.16□□□□□ -1.26
RNF4-220ENST00000513578 MBNL2Q5VZF2 373 aaKnown RBP7.16□□□□□ -1.26
RNF4-220ENST00000513578 TMEM211Q6ICI0 200 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 OR2T2Q6IF00 324 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 OR52W1Q6IF63 320 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 SLC25A26Q70HW3 274 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 MRGPRGQ86SM5 289 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 PEG10Q86TG7 708 aaKnown RBP7.16□□□□□ -1.26
RNF4-220ENST00000513578 SLC25A42Q86VD7 318 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 LHFPL1Q86WI0 220 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 TMEM17Q86X19 198 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 FBXL14Q8N1E6 418 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 CISD2Q8N5K1 135 aaKnown RBP7.16□□□□□ -1.26
RNF4-220ENST00000513578 SPERTQ8NA61 448 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 BEST4Q8NFU0 473 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 OR10AD1Q8NGE0 317 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 OR5AP2Q8NGF4 316 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 OR1J1Q8NGS3 322 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 TERB2Q8NHR7 220 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 MRGPRFQ96AM1 343 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 ZNF486Q96H40 463 aaPredicted RBP7.16□□□□□ -1.26
RNF4-220ENST00000513578 HYLS1Q96M11 299 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 SCGB3A2Q96PL1 93 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 FYTTD1Q96QD9 318 aaKnown RBP7.16□□□□□ -1.26
RNF4-220ENST00000513578 DHRS9Q9BPW9 319 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 OR2J1Q9GZK6 312 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 DECR2Q9NUI1 292 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 ELOVL5Q9NYP7 299 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 JKAMPQ9P055 326 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 ST3GAL6Q9Y274 331 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 NBEAQ8NFP9 2946 aa7.16□□□□□ -1.26
RNF4-220ENST00000513578 IGHV2OR16-5A0A0B4J2B6 119 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 TRAPPC2LH3BP13 241 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 GEMIN2O14893 280 aaKnown RBP7.15□□□□□ -1.26
RNF4-220ENST00000513578 SSNA1O43805 119 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 NOS1APO75052 506 aaPredicted RBP7.15□□□□□ -1.26
RNF4-220ENST00000513578 OR2A4O95047 310 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 OR4E1P0C645 316 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 HLA-GP17693 338 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 AMY2BP19961 511 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 BCL3P20749 454 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 IL32P24001 234 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 GABRR1P24046 479 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 HAAOP46952 286 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 NPBWR2P48146 333 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 GPM6AP51674 278 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 SNU13P55769 128 aaKnown RBP7.15□□□□□ -1.26
RNF4-220ENST00000513578 TAS2R31P59538 309 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 DHODHQ02127 395 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 RBPJQ06330 500 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 PSG7Q13046 419 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 DAZAP2Q15038 168 aaPredicted RBP7.15□□□□□ -1.26
RNF4-220ENST00000513578 TSC22D1Q15714 1073 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 ZNF718Q3SXZ3 478 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 OVCH2Q7RTZ1 564 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 C6orf201Q7Z4U5 140 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 RTN4RL2Q86UN3 420 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 Q8IYB0 196 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 TMEM185AQ8NFB2 350 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 OR8G5Q8NG78 346 aa7.15□□□□□ -1.26
RNF4-220ENST00000513578 OR5H2Q8NGV7 314 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms