RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 ABCD4O14678 606 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 PLA2G10O15496 165 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 AKR7A2O43488 359 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 LANCL1O43813 399 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 DHFRP00374 187 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 MT-ND4P03905 459 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 PTHLHP12272 177 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 TNFSF4P23510 183 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 IL24Q13007 206 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 KLF9Q13886 244 aaPredicted RBP6.9□□□□□ -1.3
HTT-209ENST00000512068 MEF2DQ14814 521 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 MOGAT2Q3SYC2 334 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 ZNF260Q3ZCT1 412 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 ACTBL2Q562R1 376 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 ATAD3CQ5T2N8 411 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 RNF144BQ7Z419 303 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 C1QL2Q7Z5L3 287 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 LINC00596Q86U02 117 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 TMEM200AQ86VY9 491 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 NEK7Q8TDX7 302 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 GPX8Q8TED1 209 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 AQP3Q92482 292 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 EMG1Q92979 244 aaKnown RBP6.9□□□□□ -1.3
HTT-209ENST00000512068 RNASE6Q93091 150 aaKnown RBP6.9□□□□□ -1.3
HTT-209ENST00000512068 CREB3L1Q96BA8 519 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 ARHGAP5-AS1Q96IT6 56 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 RHOFQ9HBH0 211 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 KCNJ16Q9NPI9 418 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 NPAP1Q9NZP6 1156 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 NLKQ9UBE8 527 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 KLK11Q9UBX7 282 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 GLS2Q9UI32 602 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 ZNF107Q9UII5 783 aaPredicted RBP6.9□□□□□ -1.3
HTT-209ENST00000512068 ST3GAL6Q9Y274 331 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 NUBP2Q9Y5Y2 271 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 MGAQ8IWI9 3026 aa6.9□□□□□ -1.3
HTT-209ENST00000512068 CACNA1AO00555 2505 aa6.9□□□□□ -1.31
HTT-209ENST00000512068 TLN1Q9Y490 2541 aaKnown RBP6.9□□□□□ -1.31
HTT-209ENST00000512068 LOC400499M0QZD8 3231 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 PCNX1Q96RV3 2341 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 hCG_1807616A0A1W2PRN6 198 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 MEIOCA2RUB1 952 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A10PA6NDY2 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A18PA6NE21 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A16PA6NEW6 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A20PA6NIJ5 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A8PA6NJQ4 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A7PA6NKC0 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A22PA8MWA6 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A12PA8MX19 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A5PA8MXJ8 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A23PA8MXZ1 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 SOCS1O15524 211 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 TPD52L2O43399 206 aaKnown RBP6.89□□□□□ -1.31
HTT-209ENST00000512068 OR7C1O76099 320 aaPredicted RBP6.89□□□□□ -1.31
HTT-209ENST00000512068 RAB3DO95716 219 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 IFNA6P05013 189 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 GRPP07492 148 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A15PP0C7V4 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A13PP0C7W8 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A14PP0C7W9 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FAM90A24PP0C7X0 464 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 SPNP16150 400 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 PRKACAP17612 351 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 AMY2BP19961 511 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 TBPP20226 339 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 BCL3P20749 454 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 CCKARP32238 428 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 RFX2P48378 723 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 BCAP31P51572 246 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 SNU13P55769 128 aaKnown RBP6.89□□□□□ -1.31
HTT-209ENST00000512068 RBM11P57052 281 aaKnown RBP6.89□□□□□ -1.31
HTT-209ENST00000512068 FGF12P61328 243 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 TAF9Q16594 264 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 ST3GAL2Q16842 350 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 MPV17LQ2QL34 196 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 RNASE10Q5GAN6 216 aaKnown RBP6.89□□□□□ -1.31
HTT-209ENST00000512068 OLFML2AQ68BL7 652 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 STEAP1BQ6NZ63 245 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 ASCL4Q6XD76 172 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 CALHM1Q8IU99 346 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 FBXL14Q8N1E6 418 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 TMEM229BQ8NBD8 167 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 NUP37Q8NFH4 326 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 OR10AD1Q8NGE0 317 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 NUDCD2Q8WVJ2 157 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 SEH1LQ96EE3 360 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 C1orf147Q96MC9 270 aaPredicted RBP6.89□□□□□ -1.31
HTT-209ENST00000512068 SYT3Q9BQG1 590 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 CACNG6Q9BXT2 260 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 PECRQ9BY49 303 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 MMP28Q9H239 520 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 ZNF442Q9H7R0 627 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 SPACA1Q9HBV2 294 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 CHMP1AQ9HD42 196 aaPredicted RBP6.89□□□□□ -1.31
HTT-209ENST00000512068 HRASLSQ9HDD0 168 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 ZNF701Q9NV72 531 aaPredicted RBP6.89□□□□□ -1.31
HTT-209ENST00000512068 SCP2D1Q9UJQ7 156 aa6.89□□□□□ -1.31
HTT-209ENST00000512068 RBMX2Q9Y388 322 aaKnown RBP6.89□□□□□ -1.31
HTT-209ENST00000512068 FRYQ5TBA9 3013 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms