RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 MREGQ8N565 214 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 ZNF561Q8N587 486 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 UBL4BQ8N7F7 174 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 C15orf54Q8N8G6 183 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 LINC00301Q8NCQ3 95 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 OR4D9Q8NGE8 314 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 OR5K2Q8NHB8 316 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 CNIH3Q8TBE1 160 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 SDSLQ96GA7 329 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 ANKRD36BP1Q96IX9 119 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 MS4A14Q96JA4 679 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 SLC35E1Q96K37 410 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 APOL4Q9BPW4 351 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 ZNF717Q9BY31 904 aaPredicted RBP2.84□□□□□ -1.95
NUP54-209ENST00000510569 DSN1Q9H410 356 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 ZNF430Q9H8G1 570 aaPredicted RBP2.84□□□□□ -1.95
NUP54-209ENST00000510569 BEX1Q9HBH7 125 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.84□□□□□ -1.95
NUP54-209ENST00000510569 MCUBQ9NWR8 336 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 SDHAF2Q9NX18 166 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 ACOT9Q9Y305 439 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 SNX24Q9Y343 169 aa2.84□□□□□ -1.95
NUP54-209ENST00000510569 FAM32AQ9Y421 112 aaKnown RBP2.84□□□□□ -1.95
NUP54-209ENST00000510569 LAMB1P07942 1786 aa2.84□□□□□ -1.96
NUP54-209ENST00000510569 COL5A3P25940 1745 aaPredicted RBP2.83□□□□□ -1.96
NUP54-209ENST00000510569 DDX60LQ5H9U9 1706 aaKnown RBP2.83□□□□□ -1.96
NUP54-209ENST00000510569 MAST2Q6P0Q8 1798 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 A0A0B4J2E0 115 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 IGHV2-70DA0A0C4DH43 119 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 A0A1B0GX12 115 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 USP27XA6NNY8 438 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 DISC1C4P0D8 188 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 KCNK1O00180 336 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 PLPP1O14494 284 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 EI24O14681 340 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 TM9SF1O15321 606 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 RGS16O15492 202 aaPredicted RBP2.83□□□□□ -1.96
NUP54-209ENST00000510569 SSNA1O43805 119 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 SLC16A7O60669 478 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 MPDU1O75352 247 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 OR7A10O76100 309 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 HPNP05981 417 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 BCHEP06276 602 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 ATP6V1B2P21281 511 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 SHMT2P34897 504 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 STC1P52823 247 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 PSPHP78330 225 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 HMGCS1Q01581 520 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 PRKCDQ05655 676 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 RAB40BQ12829 278 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 UBE2V2Q15819 145 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 DCST2Q5T1A1 773 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 FAHD2BQ6P2I3 314 aaPredicted RBP2.83□□□□□ -1.96
NUP54-209ENST00000510569 C5orf46Q6UWT4 87 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 ASCL5Q7RTU5 278 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 SLC36A1Q7Z2H8 476 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 TMEM144Q7Z5S9 345 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 ZNF547Q8IVP9 402 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 OR6V1Q8N148 313 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 METTL13Q8N6R0 699 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 KIR3DL3Q8N743 410 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 ZSCAN4Q8NAM6 433 aaPredicted RBP2.83□□□□□ -1.96
NUP54-209ENST00000510569 TMEM161BQ8NDZ6 487 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 OR52H1Q8NGJ2 320 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 OR5L2Q8NGL0 311 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 OR10X1Q8NGY0 326 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 OR6K3Q8NGY3 331 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 OR2AE1Q8NHA4 323 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 SFXN5Q8TD22 340 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 RASSF5Q8WWW0 418 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 FAHD2AQ96GK7 314 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 KCTD7Q96MP8 289 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 TSNAXQ99598 290 aaKnown RBP2.83□□□□□ -1.96
NUP54-209ENST00000510569 AIF1LQ9BQI0 150 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 TMEM121Q9BTD3 319 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 BOLA2Q9H3K6 86 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 TMEM27Q9HBJ8 222 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 RETNQ9HD89 108 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 FBXO6Q9NRD1 293 aaPredicted RBP2.83□□□□□ -1.96
NUP54-209ENST00000510569 TAS2R1Q9NYW7 299 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 SLC25A37Q9NYZ2 338 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 OR52A1Q9UKL2 312 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 FARSAQ9Y285 508 aaKnown RBP2.83□□□□□ -1.96
NUP54-209ENST00000510569 EXOSC1Q9Y3B2 195 aaKnown RBP2.83□□□□□ -1.96
NUP54-209ENST00000510569 OARD1Q9Y530 152 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 BRCA1P38398 1863 aaKnown RBP2.83□□□□□ -1.96
NUP54-209ENST00000510569 UBR3Q6ZT12 1888 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 BCL9O00512 1426 aa2.83□□□□□ -1.96
NUP54-209ENST00000510569 COL4A1P02462 1669 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 TNRC6CQ9HCJ0 1690 aaKnown RBP2.82□□□□□ -1.96
NUP54-209ENST00000510569 ATAD5Q96QE3 1844 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 KIF13BQ9NQT8 1826 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 MYH1P12882 1939 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 TRAV8-7A0A075B6U6 113 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 KIR2DS1A0A191URI9 304 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 RFPL4AA6NLU0 287 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 GJE1A6NN92 205 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 HACD1B0YJ81 288 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 RFPL4AL1F8VTS6 287 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 F8W036 122 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms