RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 CPNE2Q96FN4 548 aaPredicted RBP13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 WDYHV1Q96HA8 205 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 S100A13Q99584 98 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 SF3B5Q9BWJ5 86 aaKnown RBP13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 MS4A7Q9GZW8 240 aaPredicted RBP13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 TMEM100Q9NV29 134 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 DNAJB11Q9UBS4 358 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 BSNQ9UPA5 3926 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 MPTX1A8MV57 137 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 M0R135 149 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 BLVRBP30043 206 aaPredicted RBP13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 SLC6A9P48067 706 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 MRPS34P82930 218 aaKnown RBP13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 UBE2V2Q15819 145 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 BAP18Q8IXM2 172 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 C20orf196Q8IYI0 205 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 OR52H1Q8NGJ2 320 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 ROBO4Q8WZ75 1007 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 ZNF799Q96GE5 643 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 C2orf50Q96LR7 162 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 AQP10Q96PS8 301 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 C12orf4Q9NQ89 552 aa13.93□□□□□ -0.18
SQSTM1-213ENST00000510187 DSPP15924 2871 aaKnown RBP13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 F5H5K5 113 aa13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 APOC3P02656 99 aa13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 RPS2P15880 293 aaKnown RBP13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 CISD2Q8N5K1 135 aaKnown RBP13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 BPIFCQ8NFQ6 507 aa13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 SPSB1Q96BD6 273 aa13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 SARAFQ96BY9 339 aa13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 ZNF385AQ96PM9 386 aaKnown RBP13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 ULBP2Q9BZM5 246 aa13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 EHFQ9NZC4 300 aa13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 MCTS1Q9ULC4 181 aaKnown RBP13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 PCDHB10Q9UN67 800 aa13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 PIGLQ9Y2B2 252 aa13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 MEMO1Q9Y316 297 aa13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 ACACBO00763 2458 aa13.92□□□□□ -0.18
SQSTM1-213ENST00000510187 TPRP12270 2363 aaKnown RBP13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 C5orf63A6NC05 138 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 ZNHIT1O43257 154 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 SYNGR4O95473 234 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 FCGR2AP12318 317 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 FAHP16930 419 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 RAB35Q15286 201 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 SLC9A3R2Q15599 337 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 RSPO1Q2MKA7 263 aaPredicted RBP13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 ANKRD55Q3KP44 614 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 CHRFAM7AQ494W8 412 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 FAM27BQ5VT28 67 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 FAM122CQ6P4D5 195 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 DRAM2Q6UX65 266 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 C1QL2Q7Z5L3 287 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 ZSCAN4Q8NAM6 433 aaPredicted RBP13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 POC1AQ8NBT0 407 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 RNF141Q8WVD5 230 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 ST6GALNAC5Q9BVH7 336 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 PRDM14Q9GZV8 571 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 CYTL1Q9NRR1 136 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 EDARQ9UNE0 448 aa13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 C14orf166Q9Y224 244 aaKnown RBP13.91□□□□□ -0.18
SQSTM1-213ENST00000510187 H0YIZ8 118 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 CD79AP11912 226 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 CTRB1P17538 263 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 SERPINA2P20848 420 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 EIF5AP63241 154 aaKnown RBP13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 IL15RAQ13261 267 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 ZIC4Q8N9L1 334 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 LRRC46Q96FV0 321 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 Q96M66 194 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 PRRG4Q9BZD6 226 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 ZC4H2Q9NQZ6 224 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 CYTIPO60759 359 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 SFTPCP11686 197 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 CRYGSP22914 178 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 KLRB1Q12918 225 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 KRTCAP3Q53RY4 240 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 ZNF324BQ6AW86 544 aaPredicted RBP13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 ABLIM2Q6H8Q1 611 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 PLXDC2Q6UX71 529 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 UNQ6126/PRO20091Q6UXV3 157 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 GPR137CQ8N3F9 429 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 SEMA6DQ8NFY4 1073 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 OR5D18Q8NGL1 313 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 OR1S2Q8NGQ3 325 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 FNDC9Q8TBE3 224 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 ABHD3Q8WU67 409 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 ARL11Q969Q4 196 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 RRNAD1Q96FB5 475 aaKnown RBP13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 RBM24Q9BX46 236 aaKnown RBP13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 ASF1BQ9NVP2 202 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 PLEK2Q9NYT0 353 aa13.9□□□□□ -0.18
SQSTM1-213ENST00000510187 DNASE2O00115 360 aaPredicted RBP13.89□□□□□ -0.19
SQSTM1-213ENST00000510187 TAAR5O14804 337 aa13.89□□□□□ -0.19
SQSTM1-213ENST00000510187 ADAP1O75689 374 aa13.89□□□□□ -0.19
SQSTM1-213ENST00000510187 CST2P09228 141 aa13.89□□□□□ -0.19
SQSTM1-213ENST00000510187 LRRC18Q8N456 261 aa13.89□□□□□ -0.19
SQSTM1-213ENST00000510187 OR5T2Q8NGG2 359 aa13.89□□□□□ -0.19
SQSTM1-213ENST00000510187 NPRL2Q8WTW4 380 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms