RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 STX3Q13277 289 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 RBM39Q14498 530 aaKnown RBP8.23□□□□□ -1.09
SNF8-207ENST00000509995 TRAM2Q15035 370 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 CEP78Q5JTW2 689 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 DLEU7Q6UYE1 221 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 FAM57BQ71RH2 274 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 TPRX1Q8N7U7 411 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 TRMT10AQ8TBZ6 339 aaKnown RBP8.23□□□□□ -1.09
SNF8-207ENST00000509995 TOMM40LQ969M1 308 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 ITFG2Q969R8 447 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 RPEQ96AT9 228 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 LRGUKQ96M69 825 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 KCTD7Q96MP8 289 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 OR52B2Q96RD2 323 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 RSRP1Q9BUV0 290 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 PARD6BQ9BYG5 372 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 OR10A2Q9H208 303 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 FN3KQ9H479 309 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 RGCCQ9H4X1 137 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 VIPAS39Q9H9C1 493 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 RHCGQ9UBD6 479 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 LRP1BQ9NZR2 4599 aa8.23□□□□□ -1.09
SNF8-207ENST00000509995 TOR1AO14656 332 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 NOS1APO75052 506 aaPredicted RBP8.22□□□□□ -1.09
SNF8-207ENST00000509995 CNIH1O95406 144 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 KITP10721 976 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 ZNF121P58317 390 aaPredicted RBP8.22□□□□□ -1.09
SNF8-207ENST00000509995 GRB2P62993 217 aaKnown RBP8.22□□□□□ -1.09
SNF8-207ENST00000509995 CEACAM21Q3KPI0 293 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 FGD3Q5JSP0 725 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 TBPL2Q6SJ96 375 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 LYPD4Q6UWN0 246 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 ZNF575Q86XF7 245 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 IFT20Q8IY31 132 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 BATF2Q8N1L9 274 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 EIF1ADQ8N9N8 165 aaKnown RBP8.22□□□□□ -1.09
SNF8-207ENST00000509995 HRASLS5Q96KN8 279 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 KAT8Q9H7Z6 458 aaKnown RBP8.22□□□□□ -1.09
SNF8-207ENST00000509995 PLEKHA3Q9HB20 300 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 HES4Q9HCC6 221 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 DNAJC27Q9NZQ0 273 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 ZNF580Q9UK33 172 aa8.22□□□□□ -1.09
SNF8-207ENST00000509995 IGHV4OR15-8A0A075B7B6 117 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 A0A087WW49 117 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 TVP23AA6NH52 213 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 PRSS29PA6NIE9 313 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 OR5B21A6NL26 309 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 OR5H8P0DN80 308 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 HIST1H1CP16403 213 aaKnown RBP8.21□□□□□ -1.1
SNF8-207ENST00000509995 CDK2P24941 298 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 HSD11B1P28845 292 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 SLC15A1P46059 708 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 MRPL19P49406 292 aaKnown RBP8.21□□□□□ -1.1
SNF8-207ENST00000509995 STX1BP61266 288 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 VMACQ2NL98 169 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 HEPN1Q6WQI6 88 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 TRAPPC6BQ86SZ2 158 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 Q8N9W7 124 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 OR4K13Q8NH42 304 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 ZBTB9Q96C00 473 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 RSRC1Q96IZ7 334 aaKnown RBP8.21□□□□□ -1.1
SNF8-207ENST00000509995 ERMAPQ96PL5 475 aaPredicted RBP8.21□□□□□ -1.1
SNF8-207ENST00000509995 HSPB9Q9BQS6 159 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 CHCHD6Q9BRQ6 235 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 FNDC11Q9BVV2 318 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 ELOVL1Q9BW60 279 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 TOLLIPQ9H0E2 274 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 CCDC167Q9P0B6 97 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 LGALS13Q9UHV8 139 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 TMEM5Q9Y2B1 443 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 UBE2J1Q9Y385 318 aaPredicted RBP8.21□□□□□ -1.1
SNF8-207ENST00000509995 COMMD3-BMI1R4GMX3 469 aa8.21□□□□□ -1.1
SNF8-207ENST00000509995 A0A0J9YWU9 116 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 NCBP2LA6PVI3 153 aaKnown RBP8.2□□□□□ -1.1
SNF8-207ENST00000509995 H0Y980 276 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 J3KTA2 159 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 J3QT63 122 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 FFAR1O14842 300 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 IGF1P05019 195 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 GDNFP39905 211 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 YAP1P46937 504 aaKnown RBP8.2□□□□□ -1.1
SNF8-207ENST00000509995 PRRX1P54821 245 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 WHAMMP3Q1A5X7 153 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 OR5A2Q8NGI9 324 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 OR10A6Q8NH74 314 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 KCTD12Q96CX2 325 aaKnown RBP8.2□□□□□ -1.1
SNF8-207ENST00000509995 PGAM5Q96HS1 289 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 GAL3ST2Q9H3Q3 398 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 CCDC134Q9H6E4 229 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 TPSG1Q9NRR2 321 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 THAP1Q9NVV9 213 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 ING3Q9NXR8 418 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 MRPS28Q9Y2Q9 187 aaKnown RBP8.2□□□□□ -1.1
SNF8-207ENST00000509995 POLDIP2Q9Y2S7 368 aa8.2□□□□□ -1.1
SNF8-207ENST00000509995 DHRS12A0PJE2 317 aa8.19□□□□□ -1.1
SNF8-207ENST00000509995 TMEM82A0PJX8 343 aa8.19□□□□□ -1.1
SNF8-207ENST00000509995 FAM183AA6NL82 134 aa8.19□□□□□ -1.1
SNF8-207ENST00000509995 RGS11O94810 467 aa8.19□□□□□ -1.1
SNF8-207ENST00000509995 IGLV1-40P01703 118 aa8.19□□□□□ -1.1
SNF8-207ENST00000509995 APOC1P02654 83 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms