RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CXCR4P61073 352 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 ACTA2P62736 377 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 ACTG2P63267 376 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 ACTC1P68032 377 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 ACTA1P68133 377 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 IL24Q13007 206 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 GK3PQ14409 553 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 AADACL4Q5VUY2 407 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 ZNF322Q6U7Q0 402 aaPredicted RBP12.72□□□□□ -0.37
RAB40C-202ENST00000509637 ARHGAP24Q8N264 748 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 ASCC1Q8N9N2 400 aaKnown RBP12.72□□□□□ -0.37
RAB40C-202ENST00000509637 OR4F17Q8NGA8 305 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 SLAMF9Q96A28 289 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 OR4F4Q96R69 305 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 ADGRL4Q9HBW9 690 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 IKZF2Q9UKS7 526 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 R4GMQ9 66 aa12.72□□□□□ -0.37
RAB40C-202ENST00000509637 FAM230AA0A1W2PPH8 454 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 LOC110117498-PIK3R3F6TDL0 507 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 DCTN3O75935 186 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 VSIG8P0DPA2 414 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 CCL1P22362 96 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 DUSP1P28562 367 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 NPBWR2P48146 333 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 DYNC1I2Q13409 638 aaKnown RBP12.71□□□□□ -0.37
RAB40C-202ENST00000509637 OR4P4Q8NGL7 312 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 OR13D1Q8NGV5 346 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 ITFG2Q969R8 447 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 PKIBQ9C010 78 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 INPP5EQ9NRR6 644 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 DNAJB9Q9UBS3 223 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 GTF2A1LQ9UNN4 478 aa12.71□□□□□ -0.37
RAB40C-202ENST00000509637 IGHV2-26A0A0B4J1V2 119 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 A0A1W2PPH5 198 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 RBP4P02753 201 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 CHRM2P08172 466 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 VDAC2P45880 294 aaPredicted RBP12.7□□□□□ -0.38
RAB40C-202ENST00000509637 ESRRGP62508 458 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 EDDM3AQ14507 147 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 PTGES3Q15185 160 aaKnown RBP12.7□□□□□ -0.38
RAB40C-202ENST00000509637 ODF4Q2M2E3 257 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 ZNF829Q3KNS6 432 aaPredicted RBP12.7□□□□□ -0.38
RAB40C-202ENST00000509637 VAX1Q5SQQ9 334 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 FAHD1Q6P587 224 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 CCDC121Q6ZUS5 278 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 MEPCEQ7L2J0 689 aaKnown RBP12.7□□□□□ -0.38
RAB40C-202ENST00000509637 SLC35F2Q8IXU6 374 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 OR8H2Q8N162 312 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 ASB17Q8WXJ9 295 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 FOXRED1Q96CU9 486 aaPredicted RBP12.7□□□□□ -0.38
RAB40C-202ENST00000509637 CHST6Q9GZX3 395 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 ABCB10Q9NRK6 738 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 POLDIP2Q9Y2S7 368 aa12.7□□□□□ -0.38
RAB40C-202ENST00000509637 IGKV1-9A0A0C4DH69 117 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 hCG_1809904A0A1W2PP81 198 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 A0A1W2PPE2 198 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 A0A1W2PR64 198 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 A0A1W2PRV1 198 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 ATP8B1O43520 1251 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 ANXA8P13928 327 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 SLC34A1Q06495 639 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 BCL2L15Q5TBC7 163 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 CATSPERDQ86XM0 798 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 MYDGFQ969H8 173 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 SNX22Q96L94 193 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 CEP19Q96LK0 163 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 ZNF714Q96N38 554 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 CNN2Q99439 309 aaKnown RBP12.69□□□□□ -0.38
RAB40C-202ENST00000509637 THTPAQ9BU02 230 aa12.69□□□□□ -0.38
RAB40C-202ENST00000509637 RBFOX1Q9NWB1 397 aaKnown RBP12.69□□□□□ -0.38
RAB40C-202ENST00000509637 FAM172BPA6NC97 362 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 AQP12BA6NM10 295 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 GNGT2O14610 69 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 FKBP6O75344 327 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 RPP14O95059 124 aaKnown RBP12.68□□□□□ -0.38
RAB40C-202ENST00000509637 APOL3O95236 402 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 CD33P20138 364 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 MNAT1P51948 309 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 CBX1P83916 185 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 ZNF91Q05481 1191 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 MEF2CQ06413 473 aaPredicted RBP12.68□□□□□ -0.38
RAB40C-202ENST00000509637 MINOS1Q5TGZ0 78 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 ETV3LQ6ZN32 361 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 C18orf65Q6ZTR6 163 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 SLC25A26Q70HW3 274 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 GDPD3Q7L5L3 318 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 AQP12AQ8IXF9 295 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 RDH10Q8IZV5 341 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 PRSS35Q8N3Z0 413 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 TCEANCQ8N8B7 351 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 TBX5Q99593 518 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 TMEM133Q9H2Q1 129 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 HHLA2Q9UM44 414 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 SESN1Q9Y6P5 492 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 MINOS1-NBL1R4GNA1 71 aa12.68□□□□□ -0.38
RAB40C-202ENST00000509637 IGKV1-12A0A0C4DH73 117 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 TCRBV3S1A0A5B6 114 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 F2RL2O00254 374 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 E2F6O75461 281 aa12.67□□□□□ -0.38
RAB40C-202ENST00000509637 HAND1O96004 215 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms