RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 AZGP1P25311 298 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 ATP6V1E1P36543 226 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 HAAOP46952 286 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 NPBWR2P48146 333 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 PAX8Q06710 450 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 ST3GAL4Q11206 333 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 C6orf141Q5SZD1 244 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 RUSC1-AS1Q66K80 236 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 ACP7Q6ZNF0 438 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 KCTD8Q6ZWB6 473 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 UTS2BQ765I0 119 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 RTN4RL2Q86UN3 420 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 BCL6BQ8N143 479 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 MUC20Q8N307 709 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 Q8N7P7 452 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 SPERTQ8NA61 448 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 SETD9Q8NE22 299 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 BPIFB6Q8NFQ5 453 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 OR5A2Q8NGI9 324 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 OR5D18Q8NGL1 313 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 OR11L1Q8NGX0 322 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 SLAMF9Q96A28 289 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 FGGYQ96C11 551 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 SMIM19Q96E16 107 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 Q96MT0 163 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 SIRPDQ9H106 197 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 DUSP21Q9H596 190 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 ABCB9Q9NP78 766 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 RBFOX1Q9NWB1 397 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 CNOT2Q9NZN8 540 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 KAAG1Q9UBP8 84 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 CDC42EP3Q9UKI2 254 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 CAB39Q9Y376 341 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 RRP15Q9Y3B9 282 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 NOP16Q9Y3C1 178 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 TRRAPQ9Y4A5 3859 aa5.94□□□□□ -1.46
TOPBP1-207ENST00000509162 TRBV5-7A0A0A0MS05 114 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 TRAV40A0A0B4J280 105 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 PNMA8CA0A1B0GUJ8 204 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 FAM230AA0A1W2PPH8 454 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 MEX3AA1L020 520 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 LRRC30A6NM36 301 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 H3BS24 57 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 GABRPO00591 440 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 SIGLEC5O15389 551 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 SPRY1O43609 319 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 ANGPTL7O43827 346 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 NOS1APO75052 506 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNF737O75373 536 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 FOXH1O75593 365 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 VENTXO95231 258 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 IGFBP3P17936 291 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 CRHBPP24387 322 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 DCKP27707 260 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 MAP2K4P45985 399 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 SOX2P48431 317 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 MTNR1BP49286 362 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 SCAND1P57086 179 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 FGF12P61328 243 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 KLRD1Q13241 179 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 CHRFAM7AQ494W8 412 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 ESCO2Q56NI9 601 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 FAM27D1Q5T7N8 215 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 ATPAF1Q5TC12 328 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 TMEM244Q5VVB8 128 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 DCAF12L2Q5VW00 463 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 HCP5Q6MZN7 132 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 C1orf87Q8N0U7 546 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 PNKDQ8N490 385 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 KLHL36Q8N4N3 616 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 PARP16Q8N5Y8 322 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNRF1Q8ND25 227 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 LY6G5BQ8NDX9 201 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 OR8B3Q8NGG8 313 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 OR13C3Q8NGS6 347 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 C22orf15Q8WYQ4 148 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 TAF15Q92804 592 aaKnown RBP eCLIP5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 TNFRSF14Q92956 283 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 UPRTQ96BW1 309 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 SDSLQ96GA7 329 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 TMEM80Q96HE8 168 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 C16orf92Q96LL3 132 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 OR8B2Q96RD0 313 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 SLC6A7Q99884 636 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 PKIBQ9C010 78 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 PPIL3Q9H2H8 161 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 C19orf12Q9NSK7 152 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 NLKQ9UBE8 527 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 ZNF69Q9UC07 566 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 HHLA2Q9UM44 414 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 EXOSC1Q9Y3B2 195 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 PCDHGB1Q9Y5G3 927 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 DNAH3Q8TD57 4116 aa5.93□□□□□ -1.46
TOPBP1-207ENST00000509162 DSCAML1Q8TD84 2053 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 TRAV38-1A0A0B4J264 116 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 A0A0G2JMP0 313 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 A0A0X1KG70 313 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 A0A1W2PP11 408 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 EFCAB10A6NFE3 127 aa5.92□□□□□ -1.46
TOPBP1-207ENST00000509162 TMEM212A6NML5 194 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms